Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1792 ATGGCTCCTCCATGGGTTCAAGAGCTCCATCTCAATCACCTGAGCATTCCTATAACCATTGCTAAAATGATTTCTGTCATGCCATCAAGGCCTATTCCTGTTAAACCAGGTGACACTTTATACCTTTCCAACCTCGATGACATGATCGGAGCTCGTGTTTTTACGCCTACGGTGTACTTCTATCAATCTGATAACACAAGTTTCTCCGAAAAACCTGTCACGAAAACACTGCAGTGTGCTCTGGCCGATGTTCTGGTGCCTTATTACCCTCTCTCAGGCAGGCTCAGAGAGACCAAGAATGGTAAACTAGAAGTGTTTTTCGGACCAGATCAAGGAGCACTCATCGTCGAGGCGCGGTCTGATATCGCCTTGGCTGAATTAGGAGACCTCACAGCTCCAAACCCAGATTGGGAGCCGTTGATCTTCAAGTTTCCCGACGAAGAACAATACAAAGTCCTTGAAATGCCACTGGTCATTGCTCAGGTTACCCTTTTCCGCTGTGGTGGATTTAGCCTTGGTTTGAGGCTGTGTCATTGCATCTGTGATGGCATGGGAGCTATGCAGTTCCTAGGTGCATGGGCTGCCACTGCAAGAACAGGAACACTAGTAACAGATCCTGAGCCATGTTGGGATAGGGAAATTTTTAAGCCTCGTGACCCTCCTGAGGTGAAATTTCCCCACATGGAGTTTATGACAATTGAAGAGGGATCCAACCTGACCATGTCACTATGGCAAACCAAGCCTGTTCAAAAGTGTTACAGGATCAAGCGCGAGTTCCAGAACCGCGTGAAGGATCTTGCTCAGCCATATGATGCTGCAGGCTGCACCACTTTTGATGCCATGGCAGCTCATATTTGGAGATCCTGGGTGAAAGCTCTTGATGTAAGGCCACTAGACTACCAACTTAGGCTAACATTTTCGGTCAATGCTCGGCAGAAGCTTCAAAACCCTCCACTGAGAGAAGGGTTTTATGGAAATGTGGTGTGTGTTGCTTGCACAGCAAGCAGTGTCTCAGAGCTTGTGCATGGAAAGCTCCCACAGACTACCCTTTTGGTCCGCAAGGCGAGACAGAGTGTCTCGGAGGAGTATTTGAGATCCACAGTGGATTTTGTTGAAGTAGATAGGCCAAGGCAGCTTGAGTTTGGTGGTAAACTAACCATAACTCAATGGACTAGGTTCTCAATTTACAAGTGTGCTGATTTTGGGTGGGGTAAGCCACTCTATGCTGGTCCCATAGATTTAACACCAACACCTCAAGTTTGTGTGTTTCTACCTGAAGGGGAAGCTGATTGTACTTGTGGTTCTATGATTGTGTGCATATGCTTGCCTGAGTCTGCTGCACAGAAGTTCACACAAGCCTTGCTGTTGCTCGATTCGGTTTCTTGA 1386 0.4733 MAPPWVQELHLNHLSIPITIAKMISVMPSRPIPVKPGDTLYLSNLDDMIGARVFTPTVYFYQSDNTSFSEKPVTKTLQCALADVLVPYYPLSGRLRETKNGKLEVFFGPDQGALIVEARSDIALAELGDLTAPNPDWEPLIFKFPDEEQYKVLEMPLVIAQVTLFRCGGFSLGLRLCHCICDGMGAMQFLGAWAATARTGTLVTDPEPCWDREIFKPRDPPEVKFPHMEFMTIEEGSNLTMSLWQTKPVQKCYRIKREFQNRVKDLAQPYDAAGCTTFDAMAAHIWRSWVKALDVRPLDYQLRLTFSVNARQKLQNPPLREGFYGNVVCVACTASSVSELVHGKLPQTTLLVRKARQSVSEEYLRSTVDFVEVDRPRQLEFGGKLTITQWTRFSIYKCADFGWGKPLYAGPIDLTPTPQVCVFLPEGEADCTCGSMIVCICLPESAAQKFTQALLLLDSVS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1792 461 Gene3D - 237 454 IPR023213 -
Gso6g1792 461 PANTHER F21B7.2 12 457 - -
Gso6g1792 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 457 - -
Gso6g1792 461 Gene3D - 15 232 IPR023213 -
Gso6g1792 461 Pfam Transferase family 17 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1792 Gso-Chr6 20935818 20937532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1792 30 455 Monolignol Biosynthesis Gene Families AT5G48930 29.748 1.61e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1792 K15400 - gmx:100802814 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1270 4 32828886 32830427 Gso6g1792 6 20935818 20937532 GST