Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1781 ATGGACGGGCGACGCGCCTCGCGGGCCTCTGCGGCCGACCCCAAAGTGAGGCGCATCGGCTTCTTCGCCCCGCAGTCCGAACCCGACCCGACGCCGCCGCCTCCAAACTTCGTCTCGGTTCCTCCGCTGCGTCATCTCTCCGCTGCCGTGCCCGTCCCCGACACCGGGATTCGGCGCCAGTTGTCCGGCGACCTCGTGCCAATTGGAAGCTACAACCCCGCCGAGTCGCTGCTCGGGACCTCGCCGGCGGCGTCTTCGCTCTCTTCAAGCATAGTTGGCGTCGGCGACAAGGAGTTCTCCGAAGACTCTTCCGCCGCCGGCTGGTACCGTCGCGGCGACTCGGATTTTACCGGCGTAGGGTTTGACTTGCCGGTAGTGAAGCCTCCTGGAAATTCGCCGGCGGTGAATGCGAAAAACGTTGCCGGAGAAAAGAGGGAAGAGTCTGGCAAAGAAGTACACCCTGATCTGCCATCAATTTCAAAGCCACTGAAAGAAAAAAATACAAAGGGTGAGAGACGAGCATTGCAGGAGGCACAAAGAGCTGCAAAAGCTGCTTCTAAAGCTGATGGAAACACAACAGTTGCTGAAACTAGGAGGGCAGCCCCCAGTAAAAGAATGTGGCAGTCTTCACAAAAGAAAGATGGTCCTCTTGTTATGTCACCAGTGGCTACTGACAAGAAATCAGGAGATCGTCCTTTGGAGAAAGAGAGGAAAAAAGATGCTCCTCCTCCACGAATGCAATTTGATGATAAAAACAGAGTGGAAAAGGCCAAAAGGCGTGCTGTAGTTGATCAGAATGAAGCTAGAAACAGAGTTGAATTATTTCGCCATTTGCCTCAATATGAATGTTGGACTCAGCTTCCTAAACTTGAATCAAAGTTTTTCCAACTGGATTCAGTGCATCCTGCTGTGTTCAAGGTTGGAATGCGTTATTTGGCAGGAGATATATCTGGGAGTAATGCCCGATGTATTGAAATGCTTAGAGCATTTCAGGAAGCCATTATAGACTACTCCACACCGCCTGGGAAAGTCCTTGTCAGGGATTTAACTGCAAAAATCAGTAGTTATGTTTCATTTTTTAGTGAATGCAGACCACTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTTGTGTTGCCAAGTTGCCTTTAAGTCATACTGAATCTGAAGCAAAAGCAGCTCTTTGTTCAGATATTAATCAATTCATCAACGAAAAAATAATTCTTGCTGATAAGGTGATTGTTGGACATGCTGCTTCGAAAGTTAGGGATGGAGACGTTCTTCTTACATATGGATCATCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGATCTTGGGAAACAGTTCCGTGTTGTGGTGGTAGACTCACGACCAAAGTTTGAAAGCCGGGCCTTACTTCGTAGACTGGTGGCTAGGGGCCTGAGTTGTACATATACCCATATAAATGCTGTTTCTTATGTCATGCATGAGGTCACACGAGTTTTTCTTGGAGCATCTTCCATTCTGTGTAATGGAACTGCATATGCAAAGGTTGGGACTGCATGTGTTGCAATGGTAGCTCATACATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCTTATAAGTTTCATGAAAGGGTGCAACTTGATTCAATATGTTCTAATGAACTAGGTGACCCAGATGCTGTTGCCGTGGTTCCTGGAAGAATGGATGTCAATTATCTGGACAATTGGACTAATCAAGACAATTTGCAGCTTCTGAATTTGTTCTATGATGCTACTCCTTCAGATTATGTATCGGCCATTGTTACAGACCATGGAATGATCCCTCCTACAAGTGTGGCCGTAATTGTGCGCGAGTATGGACGAGAGCACTTGATCTAG 1875 0.4715 MDGRRASRASAADPKVRRIGFFAPQSEPDPTPPPPNFVSVPPLRHLSAAVPVPDTGIRRQLSGDLVPIGSYNPAESLLGTSPAASSLSSSIVGVGDKEFSEDSSAAGWYRRGDSDFTGVGFDLPVVKPPGNSPAVNAKNVAGEKREESGKEVHPDLPSISKPLKEKNTKGERRALQEAQRAAKAASKADGNTTVAETRRAAPSKRMWQSSQKKDGPLVMSPVATDKKSGDRPLEKERKKDAPPPRMQFDDKNRVEKAKRRAVVDQNEARNRVELFRHLPQYECWTQLPKLESKFFQLDSVHPAVFKVGMRYLAGDISGSNARCIEMLRAFQEAIIDYSTPPGKVLVRDLTAKISSYVSFFSECRPLSISMGNAIRFVKSCVAKLPLSHTESEAKAALCSDINQFINEKIILADKVIVGHAASKVRDGDVLLTYGSSCVVEMILLYAHDLGKQFRVVVVDSRPKFESRALLRRLVARGLSCTYTHINAVSYVMHEVTRVFLGASSILCNGTAYAKVGTACVAMVAHTFRVPVLICCEAYKFHERVQLDSICSNELGDPDAVAVVPGRMDVNYLDNWTNQDNLQLLNLFYDATPSDYVSAIVTDHGMIPPTSVAVIVREYGREHLI* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1781 624 MobiDBLite consensus disorder prediction 1 40 - -
Gso6g1781 624 MobiDBLite consensus disorder prediction 140 178 - -
Gso6g1781 624 Pfam Initiation factor 2 subunit family 316 608 IPR000649 GO:0044237
Gso6g1781 624 MobiDBLite consensus disorder prediction 190 215 - -
Gso6g1781 624 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 623 - -
Gso6g1781 624 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 623 - -
Gso6g1781 624 SUPERFAMILY NagB/RpiA/CoA transferase-like 313 618 IPR037171 -
Gso6g1781 624 MobiDBLite consensus disorder prediction 227 261 - -
Gso6g1781 624 MobiDBLite consensus disorder prediction 124 261 - -
Gso6g1781 624 MobiDBLite consensus disorder prediction 26 40 - -
Gso6g1781 624 Gene3D - 412 618 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1781 Gso-Chr6 20602707 20609026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1781 1 624 Eukaryotic Initiation Factors Gene Family AT5G38640 57.252 0.0 680
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1781 6 20602707 20609026 Gso6g1781 6 20602707 20609026 ECH