Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1773 ATGGAGCCCATGGACATCGTTGGGAAGGCCAAGGAAGACGCTTCTCTTCCTAAAGCGACAATGACGAAAATTATTAAAGAGATGTTGCCCCCGGACGTGCGTGTCGCCAGAGATGCACAGGATTTATTGATCGAGTGTTGTGTCGAGTTTATAAACCTTGTCTCGTCAGAGTCCAATGAAGTCTGTAACAAAGAAGAAAGAAGGACGATTGCACCGGAGCACGTGTTAAAGGCTTTAGGGGTTCTTGGATTTGGCGAGTACATCGAGGAAGTTTATGCAGCATATGAACAACACAAGTTGGAAACAATGCAAGATTCTTTAAAAGGTGCAAAGTGGAGCAACAGAGCTGAGATGACTGAGGAAGAAGCATTGGCTGAACAGCAAAGGATGTTTGCAGAGGCACGTGCAAGAATGAATGGAGGAGCCATTCAATCCAAGGAGCCAGAGGCTGACCAAAGTTTAGAGAGCTAA 471 0.4586 MEPMDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNKEERRTIAPEHVLKALGVLGFGEYIEEVYAAYEQHKLETMQDSLKGAKWSNRAEMTEEEALAEQQRMFAEARARMNGGAIQSKEPEADQSLES* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1773 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Gso6g1773 156 MobiDBLite consensus disorder prediction 137 156 - -
Gso6g1773 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Gso6g1773 156 Coils Coil 115 135 - -
Gso6g1773 156 Gene3D Histone, subunit A 5 146 IPR009072 GO:0046982
Gso6g1773 156 SUPERFAMILY Histone-fold 12 144 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1773 Gso-Chr6 20468181 20471936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1773 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 83.766 1.21e-93 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gso6g1773 CBFD_NFYB_HMF 7.9e-23 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1773 K21751 - gmx:547635 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1773 6 20468181 20471936 Gso6g1773 6 20468181 20471936 ECH