Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1760 ATGAGTTTACAATCTCAAAGCCCATCAAAGTTCACGACCCTATTCATCTCTTCCAACATGAGCAACCCTTCAGATGAAAGGGAGCAGTGTCAAAAGAAGAGGAAATCCACCATATGCGAAGCCTCTAACTTTAGGACATCAAGGAGAAGATTCTGCAGCAACAACAAAAATGAAGAGGAGATGAACAATAAGGGAGTTTCAACAACACTGAAGCTTTACGATGATCCTTGGAAGATCAAGAAGACGCTAACCGATAGCGATTTGGGAATCCTAAGTAGACTCTTGCTGGCTGCAGATTTGGTGAAGAAACAAATTTTGCCTATGTTGGGTGCATATCATGCAAGAGCTGCAGAAACTGAAGGGACCCCAGTTAGAGTTTGGGACATGGACACCAAATCCATGCACCAACTCGTTCTAAAGCGATGGTCTTCATCCAAGAGCTATGTTCTTATTGGAAAGTGGAACCAAGATTTCGTCAGAAGAAGAGATCTCAGGAAAGGTGATGAGATCGGATTTCATTGGGATCCATATAATTGCGTTTTCAATTTCTGTGTCCTTAAACAAGCTATGCCAGAGAATTAA 582 0.4192 MSLQSQSPSKFTTLFISSNMSNPSDEREQCQKKRKSTICEASNFRTSRRRFCSNNKNEEEMNNKGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGAYHARAAETEGTPVRVWDMDTKSMHQLVLKRWSSSKSYVLIGKWNQDFVRRRDLRKGDEIGFHWDPYNCVFNFCVLKQAMPEN* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1760 193 CDD B3_DNA 77 187 IPR003340 GO:0003677
Gso6g1760 193 Gene3D - 76 190 IPR015300 -
Gso6g1760 193 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 17 188 - -
Gso6g1760 193 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 17 188 - -
Gso6g1760 193 SUPERFAMILY DNA-binding pseudobarrel domain 75 185 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1760 Gso-Chr6 20141260 20142095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1760 41 173 B3 DNA Binding Superfamily AT1G25560 29.630 7.89e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1760 - - gmx:102666452 390.963