Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1738 ATGGAATTTGAAAGTGGTACACAGAAGCAAAAGGGCACATTTGCATGCTTGAAGATGGTTGCCTTAATAGCTCTATGTCTCATTCTAATTTCTCCAGCAGAATCATTTGATCCGCTGGATCCAACCGGGAACGTGACAATAAGATGGGATATCATGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACATTGTTTAACTTTCAACTGTACCGCAATATCATGAATCCTGGGTGGACACTAGGATGGACATGGGCAAAGAAGGAAATAATCTGGGCCGTGATGGGAGCTCAAGCCACAGAACAAGGAGACTGTGCAAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCAGGAGCTCCTTTCAACATGCAGTTCACCAACTGCTGCAGGGGTGGTGTGCTTACATCTTGGGGGCAGAACCCTTCTGGTGCAGTCTCAGCATTTCAGATAGGTGTTGGGCTCTCTGGCACCTCTAACAAGACTGTCAAATTGCCTAAGAACTTCAAATTGCTCGGACCAGGACCAGGATATTCATGTGGCCCTGCCAAGATTGTTCCATCCACTGCCATCCTCACAGATGATCGCAGGCGAAAAATGCAGGCATTGATGTCCTGGAATGTGACATGCACTTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGCCAGAATAACAATACCTGTGTCACGAAAGATTCAAAGATCCTGCAAGAGAATGCCACCTCACCTCACCGAAAATCAGACATCACACTCACACCAAAACCTTTGTTACAATGCACTCACCACCTGTGTCATGTCCGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGCGTCAAGATTGCCATCATCAATTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCTAATCTCAATAATGTCACCCAAGTCTATAGCTTTGAATACATGCCGCTTCTTCCCTATGAATCCATAAATGACACAGGCATGTTCTATGGTTTAAAATATTACAATGATCTGTTGATGGAAGCCGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCAAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTTCCACCTCCTGATTCATATCCTATGTTGCCAAACTCTGGCCATAAACTACCAACAACTATTACATTGATGGCAACCTATGTGGTTTTTACATTATTTTTTCATTTGGTTGTAACACTTTTTTGA 1377 0.4437 MEFESGTQKQKGTFACLKMVALIALCLILISPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAVMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNMQFTNCCRGGVLTSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTAILTDDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNNTCVTKDSKILQENATSPHRKSDITLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSGHKLPTTITLMATYVVFTLFFHLVVTLF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1738 458 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Gso6g1738 458 PANTHER COBRA-LIKE PROTEIN 1 458 - -
Gso6g1738 458 PIRSF COBRA 8 457 IPR006918 GO:0010215|GO:0031225
Gso6g1738 458 PANTHER PROTEIN COBRA 1 458 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1738 Gso-Chr6 19374329 19376565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1738 30 452 COBRA Gene Family AT3G02210 58.920 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1738 - - gmx:100813134 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1738 6 19374329 19376565 Gso6g1738 6 19374329 19376565 ECH