Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1737 ATGGAACATACCATGTTACCTGCCATTGGATCTGTTTTCCCTCGTGGTGTCTTTGCCGCACTCTTGCTCATGTTACTGTTTTCTTTCTCCACATTCACTTCTATAGAAGCCTATGATCCACTTGATCCTACCGGAAATATAACAATCAAGTGGGATGTCATTAGCTGGACTCCAGATGGCTATGTTGCTGTTGTCACAATGTACAACTTTCAACAATATCGCCACATTCAGGCCCCCGGATGGTCATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGATGGGAGCCCAAACCACAGAGCAAGGGGACTGTTCAAAGTTCAAAGCAGGCATTCCACATTGTTGTAAGAAGGACCCTACAGTTGTGGATTTACTGCCAGGGACTCCTTACAACCAGCAGATTGCAAATTGTTGCAAAGGGGGTGTCCTAAATTCATGGGGTCAGGACCCCAGCAATGCAGTAAGTTCTTTCCAGATTAGTGTTGGTTCTGCCGGAACAACAAACAAAACCGTCAAAATGCCTAAAAATTTTACCCTCAAAGCACCGGGACCTGGCTATACTTGTGGTCCTGCCAAAGTTGTGAAACCAACTGTATTTATTACCAATGACAAGAGGAGAACCACCCAAGCCATGATGACCTGGAATATTACCTGCACTTATTCTCAATTCCTGGCTCAAAAGGCACCAAGTTGCTGTGTTTCCCTCTCATCCTTCTATAATGACACAGTAGTAAACTGCCCAACCTGCACCTGTGGTTGCCGAAACAAAACAGAACCTGGCAGCTGTGTAGATCCAAATTCGCCACATTTAGCTTCAGTTGTATCAGCATCAGGCAAAACGGCAAACACGCCACTAGTCCAGTGTACCAGCCATATGTGTCCTATTCGAGTGCATTGGCATGTGAAGCTCAATTACAAAGAGTACTGGAGGGTCAAGATCACAATCACAAATTTCAATTACAGAATGAACTACTCTCAATGGAACCTTGTTGTGCAGCATCCTAATTTAGATAATATTACCCAGCTCTTCAGTTTTAATTACAAGTCACTAAATCCCTATGAGGGCTTGAATGATACAAGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTTCTTTCTTCAGCTGGATCTCTTGGTAATGTTCAGTCAGAAATCTTACTTAGAAAAGACAAATCAACCTTCACATTTGATAAGGGATGGGCCTTCCCTAGAAGAATTTATTTCAATGGGGATAACTGTGTTATGCCTCCTCCAGATGCCTACCCCTGGCTTCCAAATGCAAGTTCTAAACTAGTTTTCTCTTTACTCAGTACAGTCATAGCCACTTTAGCTTCTTTGTTAATCTTATTGAATCAATCATAG 1371 0.4274 MEHTMLPAIGSVFPRGVFAALLLMLLFSFSTFTSIEAYDPLDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWNMMGAQTTEQGDCSKFKAGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWGQDPSNAVSSFQISVGSAGTTNKTVKMPKNFTLKAPGPGYTCGPAKVVKPTVFITNDKRRTTQAMMTWNITCTYSQFLAQKAPSCCVSLSSFYNDTVVNCPTCTCGCRNKTEPGSCVDPNSPHLASVVSASGKTANTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNLDNITQLFSFNYKSLNPYEGLNDTSMLWGVKFYNDFLSSAGSLGNVQSEILLRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSKLVFSLLSTVIATLASLLILLNQS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1737 456 PANTHER COBRA-LIKE PROTEIN 15 453 - -
Gso6g1737 456 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Gso6g1737 456 PANTHER PROTEIN COBRA 15 453 IPR006918 GO:0010215|GO:0031225
Gso6g1737 456 PIRSF COBRA 10 455 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1737 Gso-Chr6 19344423 19348098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1737 20 453 COBRA Gene Family AT3G02210 72.874 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1737 - - gmx:100815779 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1737 6 19344423 19348098 Gso6g1737 6 19344423 19348098 ECH