Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1731 ATGTATAATCAAGTGAATCGCGGTTCTAATTTTGGGCAGAGTTCTGTTCCTCCGGTGCTGCCACCACCGCCACCACCACAGTATCAGCAAGCTCCGCCACATTTTCATCAATTTCCACCACCGCCACGACCACCATCTAATACTGGTGGTCCACCGCTGCCACCACCACCTCCCAACATTGGTGGTCCACCACCACCACCTCCGCCACCTCATAATGTGTATTTACCTGGACCTCCCCCTCCGCCTACTTCGTCTTCCGCAGTTCCCTTGAACCTTGCGGTTCAAGGTTCCCATAGTGTGATGCCAAATGCCGGCCGATCATATGCTGTCCCTTCTCAATTGCACCTTGGGAACACCATGGGGCCGCAAACATCTTGGGCTCCTGTGCCACCAACTAGAGTATTGCCACCGCCACCGCCACCTCCCTCGGTTTCCCAAGGACAAATTTTTTATAACCCTCCTTTCCATCGCCCTCGTCTGCAGCCCGGTGATGTTCAGAATCTGCATAATGCTCCTCCCCCACCTCCTCCATCAGTGTATTTCCATTCAACTGTTGGGAATTACCACGTTCCTTCTGGTGTTCCCCCACCATTGCCATCGTCTCCACCACCTGTTCTGCCGGCTCCGCCGCCCGTAACCTCTGCATCACCAAATGCCGCACGCACTGATGACCCTCACTCTGTGAAGGTTTCTGGCTTGGAATCAAAGGCTGTGGATTTGGTTGACGGAGTTGTAGCTTCTCATCCATCTGGTCTTGTGCCTGTACATGATTCTGATTCTAATTGGGATGGTGCAAGTTGTAGAGAGGTTGCTGGTGCTGGCAGAGATGAGGATCTTCCCCCACCCAAGCCAACAAAAGAAAAAACTTTGGAGAAGATTGAAGCTTTGTGTCAGCTTATTGCTGAGAAGGGTGCTGATATTGAAGATAAGATTCGCCAAGATGAATTTCAGAATCCTGAATATGCATTTTTGTTTGGTGGAGACCCGGGAACCGAAGCTGCAATTTCTCACACTTATTTCTTGTGGATGAAGAAGAAATATAATTTGGATACTGGATGGCATGAAAAGAAAAGGCAATCAGATATAGTATACTCTTCAGGGGAACAGTATCATCTGCATGTTACAACCGTGAGTGCTGATTCTGACATGGAAATGGAAGATGATATTACACTTTCTGACAAGGACCTAGGTTCAAATTATGCAACTGAAGTCCTAACTCATCAACATAATCGGGATGATGAAGTGTTTAGTGTGAATCAGAATATAAAGAAGCTGCAGAATTTAACAGAGAATTGCCCTGCCCAGGACATCTCATCCTGCAGTGCATCATACTTTGGATCCATGGGAGTCAGCAAACAGAATGAAGGACCAGAGACTTTATCTGGATCAGAGCACATGAAATCTGTAAGATCAGTTACCAAGGTTTGTAGTCCTGTGAATGACTCCACTAAAGTGGCTGAATTACCGCTGGGCACAGCTTTGGAAAAATCTACAGCTCCTGTAGATGATGATTTCACACGTACTGGTACTTCTGATCACAATGAAACCACTGCTACTGATAGAGATTCTGGGCAACTCATAAGGAGTGGTAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGATGACACTTCAGATAATGAAGAAGAAGGCAATGCTGCAGATGCTAATGTTTTCACAGTCTCAGGAGGTGCTGACACTGGTGTTTCAGCTGCTCATAAAGATTCTGGGAGTTATGTGGAGACTGACATTGGATCTAAGAGTCCCTTCAGTGCCCAAAAGGGCTTTGGGCCGCTCTCCAGAAAATCGCAGGGTGATTTAGAAATAGCTCCACATTTATTACAAGAGTCTAAGAAAACCCCTTACAGTAAAAAATCTGTCTCACGCTGGTCTAGTGAGCATAACCTTGAAAATCAAGTGTCTGCTTTAAAGGGCAAAGATGGATTAGAGAGTACTGGCATTGACAGTAGTAGTAAAAGTGGTAATACTGAAAAGGAAGATGAGGGGAAAACCTCAAAGTTGGAACCAAATGTTCTGAAAGTTGATGAATTCGGAAGACATCTCAAAGAAGGTCTTACAGATAGTGACTCTGATAATTCACACTATCATCGGACAAGGAGACTAAACAAAAGAGATAGAAGCTGGAGTCGCAGCCGGTCTCCTCCAGACAGGAGGAGTAGGAGGAATAGGAGGAGTCCCCGGAGGAGAAGGGATAAAAGAAACAGGTCTCACAGCTGGTCTCCCCGGCACCGAAGAAGCAGGAGTAGGTCTCCAATCTCAAGACGTTCAGGTGACTTTCGTGGTGAGAATGTGAAAAAGGACAAGGATCAGTGCTTGGACTTCCTTCGAGGAAAGTGCTATCGAGGAGCATCTTGCAAGTACATTCACCATGAATCTGACATGAATGCTACTTCAAGGCACTATAGGAATAAACATGATCTGGAAGCCAGTTCTCATGCAAAAGAATCTAAGATTAATGGAGACATGAAGAGTATTTCTTCTAAAGTGTTGGTTAATGAGCGTGATGGAGTCAGAAGTCAGGATGTGGATCTTTGCCAGAATGTAACTAGCCAGGAAGTAATGAAGAAAAAAGATGATTCATGGAGGCATGCTGGTGCATCAACTACTATTCATCTTGATGGTCATTCAGTTAATAGCAATCTAAGTAAATCTGAATATATCAGAGAGGTTGCTCCTGAAAAGCAGGAAACCATAGTAGTGAGGGAGGAGCCTAAGACTTTAATCCTTGAAAATGATGGTTTGAAAGCAGGGGATTCTCATCAGCAAAACTTAGTTGATGGTTTTCACCCTGAAGCTTTAGGCAGTGGTGATGCTTCTAAACCATCTGGTACATATAAAGATGCCATTCCCTCAGAAGATGGTTCATTTGTTCAGCAAATGCAACTCAATGTTGCAGCTGTTGGAATTCCAGAACATTCTGGTTATGCATCTCAGCATGTAAATGCATCCTTTGTGACCGGTTCATCACCTGATAGAAGATCAATTGTTTCTGCTAGTGTTAATGAAGCTCCTGGTAGTAAACCGTTACCATTGTTGTCATCGACTCAGCAACAATCAGCCACTAGTTCTGTTGGGCAATGTGTCACATCAGAGCAGCCTTCATTGCACTGTCAGGCTTCTAAAGAGTTACCTCCACAGAGTGGTTCTTCAGGGGAATTTCCACTTCATACTTACCAGTTGCCTGCTTCTGCTGTTTCACATTTCCAGGGTGAAAATCCTGTGCATATGCCTCAAATTTTTAGGCAGTATGGTGTGATGCAACAAAGTGCATTCATTCCTTTCCAATCCACTACCAGAGAAAAGTATGAACCTTATCCAGCTCCATTACACATGCAGAATGCTCACTTCAATGTACCACCTAATAGCTCTTGGACATCCTTGCCCCTGCCACCACCGCCACCACCAAGAGCGGTGTATGATTCCAGTTTAAACTCAGGAGTTGGAAAATCATATATTTCTTCTGAATTCAATCAGAGTCAATTGCATTCAAGAACTGACTTTGTTTTTCAGACTTCCATGAAGCCTGGGTTACCAACTGGTTCTCAGAATTCTGAATTTCTGGATCAAGCATACCCTCCAATGCAGGATCATTCACGAGCTTTCATGCTTACAGAACCTTTCTCTCCAAAGCATCTCCCTCAGGGGAAACCAGCTAGTCAATTACCTTCAGGCTCTAATCTCAATAGAGATGACTTTCATAATCAACTTCCTATGCAGGATTCAAAATTTTCAAGTACCCCATCATTTGGCAGCCTGCAGCCTCAACCAAATCAATTTTCCTGGAAGGTGGATGTGAACAGACTACAACCTAGTCTGGGTGGCAAGTTGCCTCCTGAAGGACATCATATGACATCTTCCCACATTGATTCATTATCACAGAAGCAACAATCAATATATAATTTTCAATGTTCTGTTTCCGAGGCTAATTTGGGTGTGCCTGGGGAGAATGCTACTGCTTCAAGATATCCACCTGATTTTCTGGATAGCAATCATTCAACTTCTCTTCCATCTTTTGGGGGATCAAGAATATCTGCTCACTATAATCCTTATGCATCAACCTTTGAGAAACCACTAACTTTCAAATTCAGTTCAAGTATTTTTAGACAGGAAAATGAAATAATCCATGGTAACAATTATGCTTCTTCAATATTGAACCATACTCCTGTGAATGGGGAAGATGGTGGTGGGGTTGGATCAAGACAGTCAGCTTCCTCATCAAAATCAGCTAGAGCTCTTGGTCAGATTTTACCTAGGTCTGGTGGTGACCAATATGACCCACTTTTTGACAGCATTGAACCATCATCCTCTTCTCTGAAAAAAAATGATTTTGATCAGAAGAAGGAAGTTACAGGTGAATCCAACATCAGCCTAAGGCCCAAAAGTTCTTACATGTCTTTGGACTCGGATGAGAAGAACAAGCACGAGGAGGTTGGGGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAAACAGCAGATGCAGAAGTAGGTGCTGTTGAAAATGAGAGCCTAAGTGATGATGTGGATGTTGCAAAAATGACTTCAGGGGAGGTTGAGATTAATCAGGTCAAGTCTCCTGGGAAAAGAAAAAAGAGTAAGGATTCCAGATCGATGAAATTGTTCAAAGTTTCCATTGCGAATTTTGTAAAGGAGGTTTTGAAACCATCATGGCGGCAAGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTGAAAAAGACTGTGGATAAAGTGTCAGGAGCCATGAAAGGCCACCGTGTACCCAAGTCCCAAGTGAAGATAAGTCAATATATTGATTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTATGA 4890 0.437 MYNQVNRGSNFGQSSVPPVLPPPPPPQYQQAPPHFHQFPPPPRPPSNTGGPPLPPPPPNIGGPPPPPPPPHNVYLPGPPPPPTSSSAVPLNLAVQGSHSVMPNAGRSYAVPSQLHLGNTMGPQTSWAPVPPTRVLPPPPPPPSVSQGQIFYNPPFHRPRLQPGDVQNLHNAPPPPPPSVYFHSTVGNYHVPSGVPPPLPSSPPPVLPAPPPVTSASPNAARTDDPHSVKVSGLESKAVDLVDGVVASHPSGLVPVHDSDSNWDGASCREVAGAGRDEDLPPPKPTKEKTLEKIEALCQLIAEKGADIEDKIRQDEFQNPEYAFLFGGDPGTEAAISHTYFLWMKKKYNLDTGWHEKKRQSDIVYSSGEQYHLHVTTVSADSDMEMEDDITLSDKDLGSNYATEVLTHQHNRDDEVFSVNQNIKKLQNLTENCPAQDISSCSASYFGSMGVSKQNEGPETLSGSEHMKSVRSVTKVCSPVNDSTKVAELPLGTALEKSTAPVDDDFTRTGTSDHNETTATDRDSGQLIRSGSPIRLLQDYASDDTSDNEEEGNAADANVFTVSGGADTGVSAAHKDSGSYVETDIGSKSPFSAQKGFGPLSRKSQGDLEIAPHLLQESKKTPYSKKSVSRWSSEHNLENQVSALKGKDGLESTGIDSSSKSGNTEKEDEGKTSKLEPNVLKVDEFGRHLKEGLTDSDSDNSHYHRTRRLNKRDRSWSRSRSPPDRRSRRNRRSPRRRRDKRNRSHSWSPRHRRSRSRSPISRRSGDFRGENVKKDKDQCLDFLRGKCYRGASCKYIHHESDMNATSRHYRNKHDLEASSHAKESKINGDMKSISSKVLVNERDGVRSQDVDLCQNVTSQEVMKKKDDSWRHAGASTTIHLDGHSVNSNLSKSEYIREVAPEKQETIVVREEPKTLILENDGLKAGDSHQQNLVDGFHPEALGSGDASKPSGTYKDAIPSEDGSFVQQMQLNVAAVGIPEHSGYASQHVNASFVTGSSPDRRSIVSASVNEAPGSKPLPLLSSTQQQSATSSVGQCVTSEQPSLHCQASKELPPQSGSSGEFPLHTYQLPASAVSHFQGENPVHMPQIFRQYGVMQQSAFIPFQSTTREKYEPYPAPLHMQNAHFNVPPNSSWTSLPLPPPPPPRAVYDSSLNSGVGKSYISSEFNQSQLHSRTDFVFQTSMKPGLPTGSQNSEFLDQAYPPMQDHSRAFMLTEPFSPKHLPQGKPASQLPSGSNLNRDDFHNQLPMQDSKFSSTPSFGSLQPQPNQFSWKVDVNRLQPSLGGKLPPEGHHMTSSHIDSLSQKQQSIYNFQCSVSEANLGVPGENATASRYPPDFLDSNHSTSLPSFGGSRISAHYNPYASTFEKPLTFKFSSSIFRQENEIIHGNNYASSILNHTPVNGEDGGGVGSRQSASSSKSARALGQILPRSGGDQYDPLFDSIEPSSSSLKKNDFDQKKEVTGESNISLRPKSSYMSLDSDEKNKHEEVGAVASTTSQNNDEYGETADAEVGAVENESLSDDVDVAKMTSGEVEINQVKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQVKISQYIDSSQRKLTKLVMGYVDKYVKV* 1630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1731 1629 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 1629 - -
Gso6g1731 1629 Gene3D - 771 871 - -
Gso6g1731 1629 ProSiteProfiles Zinc finger C3H1-type profile. 772 799 IPR000571 GO:0046872
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1485 1499 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1392 1499 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 112 126 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 270 286 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1225 1263 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 192 214 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 925 957 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1214 1263 - -
Gso6g1731 1629 SUPERFAMILY Surp module (SWAP domain) 280 347 IPR035967 GO:0003723|GO:0006396
Gso6g1731 1629 MobiDBLite consensus disorder prediction 624 639 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 87 102 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1008 1034 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1404 1419 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 723 757 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 494 532 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1042 1061 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1 227 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 16 86 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1 15 - -
Gso6g1731 1629 PANTHER EXPRESSED PROTEIN 1 1629 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1015 1034 - -
Gso6g1731 1629 Gene3D Surp module 290 348 IPR035967 GO:0003723|GO:0006396
Gso6g1731 1629 MobiDBLite consensus disorder prediction 1446 1460 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 129 147 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 660 705 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 571 770 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 500 519 - -
Gso6g1731 1629 MobiDBLite consensus disorder prediction 251 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1731 Gso-Chr6 19237524 19246043 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gso6g1731 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1731 - - gmx:100807768 2845.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1731 6 19237524 19246043 Gso6g1731 6 19237524 19246043 ECH