Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1729 ATGGCAGCAAAGCTCCTACATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGCCACCAAGTTCTCACGGCTCGCCGCATCAGCCAGAAGAGGCTTCCTTCTGGTAATTCGCCCTTCAGTGATGGCAGCTTGGAAAGAGATTCTGATAATATACTCCATCGACAAACAGCAACTGATACTGACAAGGGTGTAAATGAAAGGCAAAGAATTTCTACTGAATCATCAAGAGCATCGTTCTCTTCTTGTTCATCATCGGTGTCCTCTCTGGACTGCAAGGCTGAAGCAGAGGCTACATATGACCGGATTCTTTTTCCTGAAACTCCTTCAAGGGATGCAGCTATGAACCAATCAACCACCTCTCCCCATTTTGGATATAACTCCCTTGACCTGAGGGATGTGGTGAAAGATTCGATGTATAGGGAAGCCCGTGGACTGTCAGTGAAGACTACAGCCAAAGAGGAATCTGCCATTAATGCCGCAAAGCACAGGGATTCACCACGACCTATTCAGTTGTCCAAATCTGTTGATGGATCTTACAGAGTTGGAATAGATGGGAAACAAAGTGTGCCTATTGATCTAAAGGAGTCCATCCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGTAGAAACTAAAGAACTTCCGAGATCATCACATGAATCAAAAGATGGACACTGGAATTCCATCTCAAAGGATGCTCCTTGGTTTCCTTATGAAGGTAAAGAAACAAGCCGTTTATCTTTTGAATCACGAGAGACCATCAAATCCACACCAAAACTAAAAGAGCTTCCTAGACATTCACTGGATAGTAAGGAAGGTTCATTGCACAGTTACAGCACTGACTCAAAAGCCACTCACCACTCAAGAAACATTTACAGTGGCACCTCCACCTCAAATGACAAATTTCCTACCCTACAACAGCCTTCGGCGACCCCGAGTCGTCCACCTAGTATTGTGGCAAAATTAATGGGCTTGGAAGGTTTACCGGATTCCTCTTTGGCTGGTGATGCTCAGTCAAGTTCAACTGAAACTTACTCAGCTCAAGATAATGGTCAATTTCGAAGACCATCTAAAAATGGACTCATGAGGCCACTCCGACTTTCTAATTCTCCAAAGATCTCTTTGAAAGACCCAACTTCCCCACGGCGAAAGAATCCTGATCTGGTTATGAAACCCATCTCAAGTTCAAGGGTTCCCATTGAACCAGCACCATGGAAGCAGCAAGATGGAAATCAAAGCTCCCAGAAACCTAATTTAAGGGGCATAAAAGCTCCAGCGAGAGCACCGGATTCCTTTCCTTCTGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAGTTCAAACAATCTGGAAGGGATCTTCGAGCATTAAAACAGATACTTGAGGCAATGCAAGAAAAGGGACTATTAGAGAGCAGAAAAGTAGAACAAGCTCCAAATGTTGTTGGAAGTCAAAGTGACTATGAACCAAAAGCTACCAATCAAAATCAGAATACCAGGTCAATAAGGCAACAAAACACTCAGAGAAACAATTTTCTATCTTCCACAGTCAAGGGATCTGACTCAGCAAGGGCTTTTGAATCCCCAATAGTGATAATGAAACCGGCAAAACTTGTTGAGAAAACTGTGATTCCTGCTTCTTCAGTCATTCCAATTGGTGGCCTTTCTGGTTCCCAGAAATACCAGATTGGTGGTGTATATGTAGATAATAATAAAACTGGTACATCTACTACTCGGGTAGCAAACGATCAGTCTCCCAGAAACATTCATCGGGATGCTTCTGCCAGTTCCATTGATAAGAAAGCAAGTAGTAGTAAGACTACAAGACCTGTACAATCTCAATCCAGGCCTCAACAACTTCCAAAAGAAAATAGCCAAAGTTCAGTGAAGCACTCAAGATCTGTGAGCCCAAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGGTCTCGTCTGCCTGCCCCACCATCGGATTCAAACAAACCCAGAAGACAATCTGGTAAGAAGGCAACGGAATTGGGTTCACCAGGTGGAAGACAAAGACCCAAATCCCTCAACTTACCGCATGGTGATGAGCAACTGAGTGAGATCAGCAATGAATCAAGGAGTTTAAGTTGCCAGGGGGATGGAGTTTCTCTGCAATCAGACAGTTTAACTGTCAACTCAAAGATGGATATGGAAGTCACAAGTAGTTTACGAACTGTTGAAATTGATGACAGCCGAAGCCCATCCTTGAAGGCTGCAAAGCGATTGATTTCAGAGACAGTGCAGAAAAAATCAACTCCAAGGTTGGATGAGGAGGAGACAGTTGCAGAACTTGCAACAGATGCCCCGGAACATCCTAGTCCTATCTCAGTTCTTGATGGCTCAGTGTACAGAGATGATGTGCCATCCCCAGTAAAGCAGATATCTGAAGATTCAAAAGGTGAGGATGCTCAAGAATCCAAAGAAAATGAGATTAAAGATCAGTGGAACCCTGAAGATAGCCTTTCATTTAACAGCACTGGACCCCTAGAGATCAATCGCAAGAAATTACAGAACATAAATCACCTTGTTCAGAAGCTTCGACGACTGAACTCCAGTCACGATGAAGCTAGAATCGATTACATCGCTTCCCTGTGTGAAAACACAAATCCAGACCACAGATACATCTCCGAAATATTATTAGCTTCAGGTCTCTTACTCAGAGATCTGAGTTCCGAGTTGCTGACATTTCAACTTCACTCGTCTGTTCATCCCATTAACCCCGAGCTATTCCTTGTCTTGGAACAGACCAAGGCAAGTAGTCTGCTTTCAAAAGAAGAAAGCATCCCAGGAAAAGACGCTAATTCGAAGCTGAACAAAGAGAAATTTCACAGGAAACTCATCTTTGATTCTGTGAATGAGATTCTTGGCGCAAAATTCAGCTCCTCCCCCGAGCCATGGATTCAACCTAACAGTAACAGACTCACCAAGAAAACCTTGAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATTGAAAAGATTCAAGCCAAGAAGCCAGAATGCTCCTTAGAAGAGGAAGATGATGGTCTGAAAAATATTCTGTGTGAAGATGTTTTGCATGGCTCAGAAAGTTGGACAGATTTTCATGGTTACTTACCTGGGGTTGTTTTGGATGTTGAGAGACTGATATTTAAGGACTTGGTAGATGAGGTTGTGATTGGTGAATCAACAGGTTTGCGAGTCAAGTCATTGGTTAGGCGCAGGAAGCTATTTGGAAAGTAG 3303 0.432 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHQVLTARRISQKRLPSGNSPFSDGSLERDSDNILHRQTATDTDKGVNERQRISTESSRASFSSCSSSVSSLDCKAEAEATYDRILFPETPSRDAAMNQSTTSPHFGYNSLDLRDVVKDSMYREARGLSVKTTAKEESAINAAKHRDSPRPIQLSKSVDGSYRVGIDGKQSVPIDLKESIRVLAKLREAPWYYVETKELPRSSHESKDGHWNSISKDAPWFPYEGKETSRLSFESRETIKSTPKLKELPRHSLDSKEGSLHSYSTDSKATHHSRNIYSGTSTSNDKFPTLQQPSATPSRPPSIVAKLMGLEGLPDSSLAGDAQSSSTETYSAQDNGQFRRPSKNGLMRPLRLSNSPKISLKDPTSPRRKNPDLVMKPISSSRVPIEPAPWKQQDGNQSSQKPNLRGIKAPARAPDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKVEQAPNVVGSQSDYEPKATNQNQNTRSIRQQNTQRNNFLSSTVKGSDSARAFESPIVIMKPAKLVEKTVIPASSVIPIGGLSGSQKYQIGGVYVDNNKTGTSTTRVANDQSPRNIHRDASASSIDKKASSSKTTRPVQSQSRPQQLPKENSQSSVKHSRSVSPRLQQKKLELEKRSRLPAPPSDSNKPRRQSGKKATELGSPGGRQRPKSLNLPHGDEQLSEISNESRSLSCQGDGVSLQSDSLTVNSKMDMEVTSSLRTVEIDDSRSPSLKAAKRLISETVQKKSTPRLDEEETVAELATDAPEHPSPISVLDGSVYRDDVPSPVKQISEDSKGEDAQESKENEIKDQWNPEDSLSFNSTGPLEINRKKLQNINHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSELLTFQLHSSVHPINPELFLVLEQTKASSLLSKEESIPGKDANSKLNKEKFHRKLIFDSVNEILGAKFSSSPEPWIQPNSNRLTKKTLSAQKLLKELCFEIEKIQAKKPECSLEEEDDGLKNILCEDVLHGSESWTDFHGYLPGVVLDVERLIFKDLVDEVVIGESTGLRVKSLVRRRKLFGK* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1729 1100 Pfam Domain of unknown function (DUF4378) 897 1077 IPR025486 -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 492 536 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 262 333 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 495 536 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 655 671 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 708 736 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 262 288 - -
Gso6g1729 1100 PANTHER LONGIFOLIA PROTEIN 1 1098 IPR033334 GO:0051513
Gso6g1729 1100 PANTHER LONGIFOLIA PROTEIN 1 1098 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 775 845 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 41 58 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 41 91 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 776 791 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 349 371 - -
Gso6g1729 1100 Pfam DUF761-associated sequence motif 329 348 IPR032795 -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 345 445 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 585 736 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 289 330 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 60 83 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 816 841 - -
Gso6g1729 1100 MobiDBLite consensus disorder prediction 585 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1729 Gso-Chr6 19180684 19186697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1729 137 1099 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 47.822 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1729 - - gmx:100805643 2097.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1729 6 19180684 19186697 Gso6g1729 6 19180684 19186697 ECH