Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1701 ATGGTCTTCATGTTGATCATGATCAATATTCAGAGTTGGCTGCAGAAGCCAAAGGTATGGAGATTTGTGTGTTTCTTTTCATCTGTTGTTGGACTGCTCTGTTACGCTTTCAGCTCTTCTTTCAATAATCTATTTGGAAAGTGGACATGGTGGAAGATATTACTTTACATTGGTTTTAGTTTCATTATCTGCCTTACTGTCTTGTTTGCAAAGGTTTGGGAGTGCTCCACCTCTCCTCGGGTGGAAGCTCACATGGCCTTTTTTATTTTGATGATCACTTCTGTGTATGCTTTTTTCTTCGATAAAGAAGTGAAAGGGAAACCAGACGCATATAGCCTTGTTTCATGTGCTGCATTTGCAATCATGTCTTTGGCTTTATCAAGATTGAGTCATTTTGGTTTTGAGGTTGATCTCTTACACTTTTTCAGTGGAGTCCTAACAATACAACTCATGAAAATAAAGTTATGGTTAGTCATTGTTGGAGGGAGTTTCAGTTATTCCCTCATCATTCTTCGTTCCTCTTTGGTTGCTCCAAGAAGTGGGTATCATGGACTCCAAGACCGAGATCACGATCATGTAGTCATTGAATTTGGTTCACATTCACAATCGCAAGGAACCAGAACCAGTCCTAGTGTTACTCAAGTGGATTCGCCCCAGGCTATTGTATCTGTGGCACAAGAGGCTGATCCCCCTCCAGAAAATGAGGATCAAGGATTGTTAGTCACTCAATCACAAGGCAACAGTGACAGTGAAGATAATAGTAATATAGTGGCGCAGTTCATGAGTTGTATAGGCACTCTTAAGAAGGAGAATCAGAACCTTATCCTCACGATATTCAAGCATGTAGATGAATTCCTTAAAGCTGATTATGTCATTAAGGACCATAATATTCAATTGCTCAAGTTGCATAAGGACGACAACTTGGTGGCGGATTCCTTGCCATCTGAAATTATTAAGGACCTTCGTGAAAGCACAAGGCTGATGGTGACAACAGGGTTAAAGGAGGAATGTTTACATGTGTACAGTACATGCCGGAGGGAGTTTCTGAGTGAGATTCTATCCGCATTGGAAGAGCTCAACATGAAGGACATTGACGAGGTGGCGAAGATGCGGCATGCCATAAAAGTTATGTGTGTAGCTAATAGGATTGTACTACCCAATGAAAGGAGACTCTGTGAAAAGGTCTTTGAAGGGTTCATTCACTGTGAGGATTTGTACCCTGCATTAGGAAGAATAGATGTGTTTCAGTTCTGGAAGAACCCTGTATTACCCGTAATAGATGCAGTCAGGTTGTGGGAGAGTATAGGCATTCAGCCTCCAATATACAGAATAAATGAGTCCAGGTTTGACGACTTGTTATATCTTACTTATAGTGTTAAGGAGCAGGCCAGTGTTCCCAGCGGCAGGAATTATCGGATTAGCATTGATGTGTTGGACTACATTGAGATTTTATATCAGAATTGGAGAGGTTTATTCAAAACCATGCTTGATAAAGAGGGAAAGTTACTGTATGGACACATAGCCATGATTACAGACCTATTAGACAGCAGTTTGGAAGCCATCTCCAAAAATTACAATGACCCTAGTTTGGGTTACCTTTTCATCATCAACAATAGGAGGTTCATAGAGATAAGTGCAAAACGGCGAGGATTGAGTCCTATTTTTGGCGATGATTGGCTTCGAAAAAACACAGCAAAATTCCAACAAAACCTTGAACTCTATCAAAGAAGCTCGTGGAGTAAGATTCTGAACATTTTGAAACTGGACATCAATGAGTCAGAGCCTAATGTTGCAGCTAAGTTAATGAAAAACAAGCTTTGTTCCTTCAATGAACACCTTGATGATATATGCAACACTCAGGCTACCTGGTCTGTTTTAAATGAGGAGTTAAGGGAACAAATAATAAAATCCATAGAAAACATCTTGTTGCCTGCATATGGAAACTTCATTGCGAGATTGCAGGATTTTCTTGGTAATCATGCTTTTGAGTACATTGAGTATGGAATGTTTGACATTCAAGATCGACTCAATAATTTGTTTCTTGTAAGAATGTAG 2055 0.399 MVFMLIMINIQSWLQKPKVWRFVCFFSSVVGLLCYAFSSSFNNLFGKWTWWKILLYIGFSFIICLTVLFAKVWECSTSPRVEAHMAFFILMITSVYAFFFDKEVKGKPDAYSLVSCAAFAIMSLALSRLSHFGFEVDLLHFFSGVLTIQLMKIKLWLVIVGGSFSYSLIILRSSLVAPRSGYHGLQDRDHDHVVIEFGSHSQSQGTRTSPSVTQVDSPQAIVSVAQEADPPPENEDQGLLVTQSQGNSDSEDNSNIVAQFMSCIGTLKKENQNLILTIFKHVDEFLKADYVIKDHNIQLLKLHKDDNLVADSLPSEIIKDLRESTRLMVTTGLKEECLHVYSTCRREFLSEILSALEELNMKDIDEVAKMRHAIKVMCVANRIVLPNERRLCEKVFEGFIHCEDLYPALGRIDVFQFWKNPVLPVIDAVRLWESIGIQPPIYRINESRFDDLLYLTYSVKEQASVPSGRNYRISIDVLDYIEILYQNWRGLFKTMLDKEGKLLYGHIAMITDLLDSSLEAISKNYNDPSLGYLFIINNRRFIEISAKRRGLSPIFGDDWLRKNTAKFQQNLELYQRSSWSKILNILKLDINESEPNVAAKLMKNKLCSFNEHLDDICNTQATWSVLNEELREQIIKSIENILLPAYGNFIARLQDFLGNHAFEYIEYGMFDIQDRLNNLFLVRM* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1701 684 MobiDBLite consensus disorder prediction 228 252 - -
Gso6g1701 684 PANTHER PROTEIN, PUTATIVE-RELATED 11 681 - -
Gso6g1701 684 MobiDBLite consensus disorder prediction 237 252 - -
Gso6g1701 684 SUPERFAMILY Cullin repeat-like 306 680 IPR016159 -
Gso6g1701 684 Gene3D Exocyst complex component Exo70 240 408 - -
Gso6g1701 684 Gene3D Exocyst complex component Exo70 446 683 - -
Gso6g1701 684 Pfam Exo70 exocyst complex subunit 499 677 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso6g1701 684 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 681 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1701 Gso-Chr6 18391730 18394244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1701 294 680 EXO70 exocyst subunit family AT5G58430 35.135 1.37e-61 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1701 - - gmx:100795016 1359.36