Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1694 ATGGTCTTCATGTTGATCATAATCAATATTCAGAGTTGGCTGCAGAAGCCAAAGGTATGGAGATTTGTGTGTTTCTTTTCATCTGTTGTTGGACTGCTCTGTTACGCTTTCAGCTCTTCTTTTAATAATCTATTTGGAAAGTGGACATGGTGGAAGATATTACTTTACATTGGTTTTAGTTTCATTATCTGCCTTACTGTCTTGTTTGCAAATGTTTGGGAGTGCTCCACCTCTCCTCGGGTGGAAGCTCACATGGCCTTTTTTATTTTGATGATCACTTCTGTGTACTCTTTTTTCTGCGATAAAGAAGTGAAAGGGAAACCAGACGCATATAGCCTTGTTTCATGTGCTGCATTTGCTATCATGTCTTTGGCTTTATCAAGATTGAGTCATTTTGGTTTTGAGGTTGATCTCTTAGTCTTTTTCAGCGGACTCCTAATAATGCAACTCATGAAAATAAAGTTATGGTTAGTCATTGTTGGAGGGAGTTTCAGTTATTCCCTCATCATTCTTCGTTCCTCTTTGGTTGCTCCAAGCAGTGGGTATCTTCATGGACTCCAAGACCAAGATCAACATCATGTAGTCATTGAATTTGGTTCACATTCACAATCGCAAGGAACCAGAACCAGTCCTAGTGTTACTCAAGTGGATTCGCCCCAGGCTATTGTATGTGTGGCACAAGAGACTGGTTCCCCTCCAGAAATTGAGGATCTAGGATTGTTAGTCACTGAATCGCAACAAAGAATTAATGATAGTGATAACAATAGTATTGTGACACAGTTCATGGGTTGCATAGAGGCACTTAAGAAGGAGAATGAGAAAGTCATTTTCACAATTTTCAAGCATGCTGAGGAATACCTCAAAGCTAGTCTTGTCCAGACTCCAGTGCTGCAATTGCATTGCGATGACAACTTGGTGGTGGATTCTCTGCCATCAGTTATTATCAATGACCTTTGTGAATGTGTAAGGCTGATGGTGACAGCAGGGTTAAAGGAGGAATGCATTGACGTGTACATTACTTGGCGGAGGGAGTTTCTGGGTGAGATGCTATCATGGTTGATAAAGCTCAAAATTGCCCGGTTTTATATAAAAGCTTTGTGCGTAGCTGATAGGATATTATTACCCAATGAAAGAAGACTATGTGAATGCGTCTTTGAGGGGTCCATTCCCTTTGAGGATAAGTACCCTGCATTACCGGGAATACATAGGTTCGGGTTTCGGAAGAGTTTGGACAGTTATCCTGGATTGCCCGAAACAATACATGGACGTAAGTTCGGGGAATTGTTAAGTCTTACTTACGGTGTTAAGGAGAAAGCCATTGTTCCCGGCGGCAGGGTTCATCAGATTACCCTTGATGTGCTGGACTACGCTGGGATTATAGATGTGCAGTTAACAGACCTGTTAGACAGCAGTTTGGAAGGAAAGTTTCCACTGAATAACATAGCCATGATAACAAACCTGTTAGACAGCAGTTTGGAAGCCAACTCCCAAAATTACCATGATCCTATTTTGGGTTACGTTTTCATCATCAACAATCGAAGCTACATACGGCAAAGGGCAATGCGGGGTGGATTGAGACATATTCTTGGAAATGACTGGATTCGAAAAAACACAACTAGTATCAAAGAAAACCTTCAACTCTATCTGAGAAGCTCATGGAATAAGATCTTGGATATTTTGAAGCTGGACATCAATGAGTCAGAGCCTAATGTTGCGGCACAGTTAATGAAAAACAAGCTTCGTTCCTTCAACGAACACTTCGATGATATATGCAACGTTCAGTCTACGTGGTTTGTCTTCACTAAGGAGCTAAGGAGAAAAATAATAGAATCCATAGAAAAGATCTTATTGCCAGCCTATGGAAACTTCATTGGGAGGTTGCAGGATTTTCTTGGTAACCAAGCTTATGAGCACATTGAGTATGGAATGTTTGACATTCAAGATAGACTCAACAATTTGTTTCTTGTAAGAGAGTAG 1977 0.4077 MVFMLIIINIQSWLQKPKVWRFVCFFSSVVGLLCYAFSSSFNNLFGKWTWWKILLYIGFSFIICLTVLFANVWECSTSPRVEAHMAFFILMITSVYSFFCDKEVKGKPDAYSLVSCAAFAIMSLALSRLSHFGFEVDLLVFFSGLLIMQLMKIKLWLVIVGGSFSYSLIILRSSLVAPSSGYLHGLQDQDQHHVVIEFGSHSQSQGTRTSPSVTQVDSPQAIVCVAQETGSPPEIEDLGLLVTESQQRINDSDNNSIVTQFMGCIEALKKENEKVIFTIFKHAEEYLKASLVQTPVLQLHCDDNLVVDSLPSVIINDLCECVRLMVTAGLKEECIDVYITWRREFLGEMLSWLIKLKIARFYIKALCVADRILLPNERRLCECVFEGSIPFEDKYPALPGIHRFGFRKSLDSYPGLPETIHGRKFGELLSLTYGVKEKAIVPGGRVHQITLDVLDYAGIIDVQLTDLLDSSLEGKFPLNNIAMITNLLDSSLEANSQNYHDPILGYVFIINNRSYIRQRAMRGGLRHILGNDWIRKNTTSIKENLQLYLRSSWNKILDILKLDINESEPNVAAQLMKNKLRSFNEHFDDICNVQSTWFVFTKELRRKIIESIEKILLPAYGNFIGRLQDFLGNQAYEHIEYGMFDIQDRLNNLFLVRE* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1694 658 Gene3D Exocyst complex component Exo70 419 658 - -
Gso6g1694 658 Gene3D Exocyst complex component Exo70 238 397 - -
Gso6g1694 658 SUPERFAMILY Cullin repeat-like 259 654 IPR016159 -
Gso6g1694 658 PANTHER PROTEIN, PUTATIVE-RELATED 11 655 - -
Gso6g1694 658 Pfam Exo70 exocyst complex subunit 480 651 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso6g1694 658 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 655 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1694 Gso-Chr6 18280015 18282356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1694 292 654 EXO70 exocyst subunit family AT5G58430 35.160 3.99e-55 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1694 - - gmx:100789752 1249.96