Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1693 ATGGTCTTCATGTTGATCATGATCAATATTCAGATTTGGCTGCAGAAGCCAAAGGTATGGAGATTTGTGTGTTTCTTTTCATCTGTTGTTGGACTGCTCTGTTACGCTTACAGCTCTTCTTTTAATAATCTATTTGGAAAGTGGACATGGTGCAAGATATTACTTTACATTGGTTTTAGTTTCATTATCTGCCTTACTGTCTTGTTTGCAAATGTTTGGGAGTGCTCCACCTCTCCTCGGGTGGAAGCTCACATGGCCTTTTTTATTTTGATGATCACTTCTGTGTACTCTTTTTTCTTCGATAAAGTAGTGAAAGGGAAACCAGACGCATATAGCCTTGTTTCATGTGCTGCATTTGCTATCATGTCTTTGGCTTTATCAAGATTGAGTCATTTTGGTTTTGAGGTTGATCTCTTAGTCTTTTTCAGTGGACTCCTAATATTACAACTCATGAAAATAAAGTTATGGTTAGTCATTGTTGGAGGGAGTTTCAGTTATTCCCTCTTCATTCTTCGTTCCTCTTTGGTTGCTCCAAGAAGTGGGCATGATCATGGACTCCAAGACCGAGATCATGATCATGGACTCCAAGACCGGGTTCCTCATCATGTCATTGACTTAGGTTCACATTCACAATCGCAAGGAACCAGAACCAGTCCTAGTGTTACTCAAGTGGATTCGACCCAGGCTATTGTATCTGTGGCACAAGAGGCTGATTCCCCTCCAGAAATTGAGGATCTAGGATTGTTAGTCACTGAATCACAACAAAGAAATAATGATAGTGATAACAATAGTATTGTGACACAGTTCATGGGTTGCATAGAGGCGCTTAAGAAGGAGAATGAAAATGTTATTTTAACAATTTTCAAGCATGCTGAGGAATACCTCAAAGCTAGTCTTGTCCAGACTCCAGATCTGCAATTGCATTGCGATGACAACTTGGTGGTGGATTCTCTGCCATCAGTTATTATCAATGACCTTCGTGAATGTGTAAGGCTGATGGTGACAGCAGGGTTGAAGGAGGAATGCATTGACGTGTACATTACTTGGCGGAGGGAGTTTCTGGGTGAGATGCTATCATGGTTGATAAAGTTCAAAATTGGCCGGTTTTATATAAAAGCTTTGTGCGTAGCTGATAGGATATTATTACCCAATGAAAGAAGACTATGTGAATGCGTCTTTGAAGGGTCCATTCCCCTTGAGGATAAGTACCCTGCATTACCCGGAATACATAGGTTCGGGTTTCGGAAGAGTTTGGACAGTTACCCTGCATTGCGGGACAAGTTGTTGATAGGTTTGGGCATTCTCTCACCACACGGAATACGTAAGTTCGGGGAATTGTTAAGTCTTACTTACGGTGTTAAGGAGAAAGCCATTGTTCCCGGCGGCAGGGTTCATCAGATTACCCTTGATGTGCTGGACTACGCTGGGATTATAGATGTGCAGTTAACAGTCCTGTTAGACAGCAGTTTGGAAGGAAAGTTTCCACTGAATAACATAGCCATGATAACAAACCTGTTAGACAGCAGTTTGGAAGCCAACTCCCAAAATTACCATGATCCTATTTTGGGTTACGTTTTCATCATCAACAATCGAAGCTACATACGGCAAAGGGCAATGCGGGGTGGATTGAGACATATTCTTGGAAATGACTGGATTCGAAAAAACACAACTAGTATCAAAGAAAACCTTCAACTCTATCTGAGAAGCTCATGGAATAAGATCTTGGATATTTTGAAGCTGGACATCAATGAGTCAGAGCCTAATGTTGCGGCACAGTTAATGAAAAACAAGCTTCGTTCCTTCAACGAACACTTCGACGATATATGCAACATTCAGTCTACGTGGTTTGTCTTCACTAAGGAGCTAAGGAGAAAAATTATACAATCCATAGAAAAGATCTTGTTGCAAGCATATGGAAACTTCATTGGGAGGTTGCAGGATTTTATTGGTAACCAAGCTTATGAGCACATTGAGTATGGAATGTTTGACATTCAAGATAGACTCAACAATTTATTTCTTGTAAGAGAGTAG 2031 0.4077 MVFMLIMINIQIWLQKPKVWRFVCFFSSVVGLLCYAYSSSFNNLFGKWTWCKILLYIGFSFIICLTVLFANVWECSTSPRVEAHMAFFILMITSVYSFFFDKVVKGKPDAYSLVSCAAFAIMSLALSRLSHFGFEVDLLVFFSGLLILQLMKIKLWLVIVGGSFSYSLFILRSSLVAPRSGHDHGLQDRDHDHGLQDRVPHHVIDLGSHSQSQGTRTSPSVTQVDSTQAIVSVAQEADSPPEIEDLGLLVTESQQRNNDSDNNSIVTQFMGCIEALKKENENVILTIFKHAEEYLKASLVQTPDLQLHCDDNLVVDSLPSVIINDLRECVRLMVTAGLKEECIDVYITWRREFLGEMLSWLIKFKIGRFYIKALCVADRILLPNERRLCECVFEGSIPLEDKYPALPGIHRFGFRKSLDSYPALRDKLLIGLGILSPHGIRKFGELLSLTYGVKEKAIVPGGRVHQITLDVLDYAGIIDVQLTVLLDSSLEGKFPLNNIAMITNLLDSSLEANSQNYHDPILGYVFIINNRSYIRQRAMRGGLRHILGNDWIRKNTTSIKENLQLYLRSSWNKILDILKLDINESEPNVAAQLMKNKLRSFNEHFDDICNIQSTWFVFTKELRRKIIQSIEKILLQAYGNFIGRLQDFIGNQAYEHIEYGMFDIQDRLNNLFLVRE* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1693 676 Pfam Exo70 exocyst complex subunit 499 669 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso6g1693 676 PANTHER PROTEIN, PUTATIVE-RELATED 11 673 - -
Gso6g1693 676 Gene3D Exocyst complex component Exo70 435 676 - -
Gso6g1693 676 Gene3D Exocyst complex component Exo70 242 405 - -
Gso6g1693 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 673 IPR004140 GO:0000145|GO:0006887
Gso6g1693 676 SUPERFAMILY Cullin repeat-like 294 672 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1693 Gso-Chr6 18256253 18258698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1693 300 672 EXO70 exocyst subunit family AT5G58430 35.747 6.53e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1693 - - gmx:100789752 1189.87