Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1692 ATGGTCTTCATGTTGATCATGATCAATATTCAGAGTTGGCTGCAGAAGTCAAAGGTATGGAGATTTGTGTGTTTCTTTTCATCTGTTGTTGGACTCCTCTGTTACGCTTTCAGCTCTTCTTTCAATAATCTATTTGGAAAGTGGACATGGTGGAAGATATTACTTTACATTGGTTTTATTTTCATTATCTGCCTTACTGTCTTGTTTGCAAATGTTTGGGAGTGCTCCACCTCTCCTCGGGTGGAAGCTCACATGGCCTTTTTTATTTTGATGATCACTTCTGTGTACTCTTTTTTCTTCGATAAAGTAGTGAAAGGGAAACCAGACGCATATAGCCTTGCTTCATGTGCTGCATTTGCTATCATGTCTTTGGCTTTATCAAGATTGAGTCATTTTGGTTTTGAGGTTGATCTCTTAGTCTTTTTCAGTGGACTCCTAATATTACAACTCATGAAAATAAAGTTATGGTTAGTCATTGTTGGAGGGAGTTTCAGTTATTCCCTCATCATTCTTCGTTCCTCTTTGGTTGCTCCAGGAAGTGGGTATCATCATGGACTCCAAGACCGAGATCATGATCATGTAGTCATTGACTTTGGTTCACATGCACAATCGCAAGGAACAAGAACCAGTCCTAGTGTTACTCAAGTGGATTCCCCCCAGGCTATTGCATCTGTGGCACAAGAGGCTGATTCCCCTCAAGAAATTGAGGATCTAGGATTGTTAGTCACTGAATCACAACAAAGAATTAATGATAGTGATAACAATAGTATTGTGACACAGTTCATGGGTTGCATAGAGGCCCTAAAGAAGGAGAATGAAAATGTTATTTTAACAATTTTCAAGCATGCTGAGGAATACCTCAAAGCTAGTCTTGTCCAGACTCCAGATCTGCAATTGCATTGCGATGACAACTTGGTGGTGGATTCTCTGCCATCAGTTATTATCAATGACCTTCGTGAATGTGTAAGGCTGATGGTGACAGCAGGGTTAAGGGAGGAATGCATTGACGTGTACATTACTTGGCGGAGGGAGTTTCTGAGTGAGATACTATCAGGGTGGATAGAGCTCAAAATTGGCAACACGATTAAGACCGAGTTTTTTATAAAAGCTTTGTGCTTAGCTGATAGGATACTATTACCCAATGAAAGAAGACTCTGTGAATGCGTCTTTGAAGGGTCCATTCCCCTTGAGGATAAGTACCCTGCATTACCCGGAATACATAGGTTCGGGTTTCGGAAGAGTTTGGACAGTTACCCTGCATTGCGGGACAAGTTGTTGATAGATTTGGACATTGTCTCACCATTACACGGAATACGTCAGTTCGGGGAATTGTTAAGTCTTACTTACGGTGTTAAGGAGAAAGCCATTGTTCCCGGCGGCAGGGTTCATCAGATTACCCTTGATGTGCTGGACTACGCTGGGATTCATTATTTGCATTCATTGAACCCCATGACTTATGAAGAAGGATTTCCACTGAATAGCATAGCCATGATAACAGACCTGTTAGACAGCAGTTTGGAAGCCAACTCCCAAAATTACCATGATCCTATTTTGGGTTACGTTTTCATCATCAACAATCGAAGCTACATACAGCAAAGGGCAATGCAGCGTGAATTGAGATATATTCTTGGAAATGACTGGATTGAAAAAAACACAACTAGTATCCAAGAAAACCTTCAACTCTATCTGAGAAACTCATGGAATAAGATCTTGGATATTTTGAAGCTGGACATCAATGAGTCAGAGCCTAATGTTGCGGCACAGTTAATGAAAAACAAGCTTCGTTCCTTCAACGGACACTTCGATGATATATGCAACGTTCAGTCTACGTGGTTTGTCTCAACTGAGGGGCTAAGGAGAATAATGATAGAATCCATAGAAAAGATCTTGTTGCCAGCATATGGAAACTTCATTGGGAGGTTGCAGGATTTTCTTGGTAAGGAAGCTTATGAGCACATTGAGTATGGATTGTTTGACGTTAAAGATAGACTCAACAATTTGTTTCTTGTAAGAGAGTAG 2019 0.4071 MVFMLIMINIQSWLQKSKVWRFVCFFSSVVGLLCYAFSSSFNNLFGKWTWWKILLYIGFIFIICLTVLFANVWECSTSPRVEAHMAFFILMITSVYSFFFDKVVKGKPDAYSLASCAAFAIMSLALSRLSHFGFEVDLLVFFSGLLILQLMKIKLWLVIVGGSFSYSLIILRSSLVAPGSGYHHGLQDRDHDHVVIDFGSHAQSQGTRTSPSVTQVDSPQAIASVAQEADSPQEIEDLGLLVTESQQRINDSDNNSIVTQFMGCIEALKKENENVILTIFKHAEEYLKASLVQTPDLQLHCDDNLVVDSLPSVIINDLRECVRLMVTAGLREECIDVYITWRREFLSEILSGWIELKIGNTIKTEFFIKALCLADRILLPNERRLCECVFEGSIPLEDKYPALPGIHRFGFRKSLDSYPALRDKLLIDLDIVSPLHGIRQFGELLSLTYGVKEKAIVPGGRVHQITLDVLDYAGIHYLHSLNPMTYEEGFPLNSIAMITDLLDSSLEANSQNYHDPILGYVFIINNRSYIQQRAMQRELRYILGNDWIEKNTTSIQENLQLYLRNSWNKILDILKLDINESEPNVAAQLMKNKLRSFNGHFDDICNVQSTWFVSTEGLRRIMIESIEKILLPAYGNFIGRLQDFLGKEAYEHIEYGLFDVKDRLNNLFLVRE* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1692 672 SUPERFAMILY Cullin repeat-like 258 668 IPR016159 -
Gso6g1692 672 Gene3D Exocyst complex component Exo70 437 672 - -
Gso6g1692 672 Gene3D Exocyst complex component Exo70 238 402 - -
Gso6g1692 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 669 IPR004140 GO:0000145|GO:0006887
Gso6g1692 672 PANTHER PROTEIN, PUTATIVE-RELATED 11 669 - -
Gso6g1692 672 Pfam Exo70 exocyst complex subunit 495 665 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1692 Gso-Chr6 18244361 18246802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1692 292 668 EXO70 exocyst subunit family AT5G58430 35.763 6.89e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1692 - - gmx:100789752 1107.43