Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1677 ATGGATAATAATAACAACAACTCCGGGTTTGTTCCGAATAATGATACTGATGATGACTGTACATTTCTCCAAACCTTGTTGGAAATGGACCCCCAACATTTCTATTTACCCACTGAAGAATTCGATTCACTGTCCCAACAACAGCAACAAAAAAATGATCCTTTTGGCGTTGAAAAGGGTAATAAAGTTTCCTTCCTGCAGGGAAATAATAATAACGATTTTCCCATTGGAGAAGGAGTAGTTCCTGATGTTGTTGATGTGGAGGAGGAAGAGGGTCCACCGAGGGGGGCGGGTAAGGAACTGATCCCCGAAGGCCAAGGTGATCGATTCTTCATACATGGCGATGATATTTTTTTCTTTGGAGAAGGAGGAGTTGGTAATAACGTGGATCCCCCACAAGAGAATCAAACTCAGCCACCAAATAACCAAGATGTGAGGTCACTTTGTCCTTGGCCCCCACCACCAGAGCCATTCTCTTGCAGTTGCTGTGAAGTTCTTAGACAAATAAATTACACCAATGGTGTTAGGTTTGACAAGCTTGAGATTCATGGAACAGTCGGGGTGATTAACCACGCAATATGCCACGTTGAGGATAAGACATCGAATCGTCCTCCAAGGGACACTTATCAAATAATCGATTTCTGCAATAAAAACACAGAAGAAATAAGGAATTTCCTAAATGTTTACTGTAAAGAGAGGATTGAAGCAGGGTTCATTCCCATAGAAGATCCGTCGATGTCTGCCTTTTATGATGCCCTCTGCACTGGAATGGATTGGACTGAAGTTTCCAATGACGTAGACGATGATTTGGGTCCACCAAATGGCACGGAGCAAGAGTCGGAGTCTGAACCTGAGGCTGGGAATGGAAGAAGGGCTTCAACTTCTAGGCCTAGACGACGTGATATGGCAGTTCAGAGGCAGAGAGTACCAAGGATGACATTGAGTGATTTGAGCGGTGTCTTCCATTTGACTATTAGTGCTGCAGCGGTTAAACTGGACGTAAGTAACTCTACCGTGAAGAGTATATGCCGCAGAGGAAAATTGAAAAGATGGCCCCAAAGAAAGGTGCAAAGCCTTGCCAAGAAGGTCAGAGTACTCGTTAGAGCATTGAATTCGCCTGATCCAGGGGTGAAGCGAAGAACTCAAGATGAAATTCGAAGACTTCAGAAAGAAATAATTGAGAATTGTGGTGGAATTACCCCAACCGGAATACCGATGCTCCAATTCGATGAAGAAGAATGA 1242 0.4388 MDNNNNNSGFVPNNDTDDDCTFLQTLLEMDPQHFYLPTEEFDSLSQQQQQKNDPFGVEKGNKVSFLQGNNNNDFPIGEGVVPDVVDVEEEEGPPRGAGKELIPEGQGDRFFIHGDDIFFFGEGGVGNNVDPPQENQTQPPNNQDVRSLCPWPPPPEPFSCSCCEVLRQINYTNGVRFDKLEIHGTVGVINHAICHVEDKTSNRPPRDTYQIIDFCNKNTEEIRNFLNVYCKERIEAGFIPIEDPSMSAFYDALCTGMDWTEVSNDVDDDLGPPNGTEQESESEPEAGNGRRASTSRPRRRDMAVQRQRVPRMTLSDLSGVFHLTISAAAVKLDVSNSTVKSICRRGKLKRWPQRKVQSLAKKVRVLVRALNSPDPGVKRRTQDEIRRLQKEIIENCGGITPTGIPMLQFDEEE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1677 413 PANTHER RWP-RK DOMAIN PROTEIN 5 397 - -
Gso6g1677 413 MobiDBLite consensus disorder prediction 292 306 - -
Gso6g1677 413 MobiDBLite consensus disorder prediction 264 309 - -
Gso6g1677 413 ProSiteProfiles RWP-RK domain profile. 299 380 IPR003035 -
Gso6g1677 413 PANTHER PROTEIN RKD4 5 397 IPR044607 GO:0003700
Gso6g1677 413 MobiDBLite consensus disorder prediction 41 55 - -
Gso6g1677 413 Pfam RWP-RK domain 312 359 IPR003035 -
Gso6g1677 413 MobiDBLite consensus disorder prediction 41 78 - -
Gso6g1677 413 MobiDBLite consensus disorder prediction 129 144 - -
Gso6g1677 413 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1677 Gso-Chr6 18066026 18068333 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gso6g1677 RWP-RK 7.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1677 - - gsj:114414137 801.971