Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1653 ATGGGAAAAGACTCAAAGCCAAAGGAGTCCGGAGGCAAGGGAAAGGGGAAACAGGCTGCAAGTGGAAGTGATGAGAATGCTTCTAAGGGAAAAGGAAAAGGTGGGAAAGGTGGAGATGGGCTTGGTACTTGCACCTATGTCAAAGCTAGGCATATCCTATGTGAGAAACAAGGTAAGATCAATGAAGCCTACAAGAAGCTGCAGGATGGTTGGCTTGGCAATGGAGACAAGGTCCCACCAGCTGAGTTTGCAAAGGTAGCACAAGAGTATTCAGAATGTCCATCAGGAAAGAAGGGTGGAGACCTTGGATGGTTTCCCCGAGGAAAGATGGCTGGGCCATTTCAGGAAGTTGCCTTCAACACACCTGTTGGAGCTACTAGTGCTCCTTTCAAATCGACGCATGGCTACCATATTATCTTAAGTGAAGGAAGAAAGAACTGA 441 0.4739 MGKDSKPKESGGKGKGKQAASGSDENASKGKGKGGKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLGNGDKVPPAEFAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSEGRKN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1653 146 MobiDBLite consensus disorder prediction 1 40 - -
Gso6g1653 146 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 83 103 IPR023058 -
Gso6g1653 146 Pfam PPIC-type PPIASE domain 47 139 - -
Gso6g1653 146 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 146 - -
Gso6g1653 146 SUPERFAMILY FKBP-like 45 145 - -
Gso6g1653 146 Gene3D - 45 144 IPR046357 GO:0003755
Gso6g1653 146 PANTHER - 1 146 IPR043323 GO:0003677|GO:0003755|GO:0006364
Gso6g1653 146 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 44 143 IPR000297 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1653 Gso-Chr6 17615869 17618450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1653 47 142 Sulfurtransferasese or Rhodanese AT5G19370 32.653 1.61e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1653 K09579 - gmx:100801197 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1653 6 17615869 17618450 Gso6g1653 6 17615869 17618450 ECH
Gso4g1397 4 41168449 41171061 Gso6g1653 6 17615869 17618450 GST