Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1637 ATGGAGAATCAGCAACTAACGTTTTGGAAGTCCAATTATGATATTGATGACTATTATCCATTTGCACCTACGTGCCAATTTTCTTCATATGATTATTGCGGCTGGGGTAGTGCCGCTGATGGGTATCATTGGCCACATGAATTTCCTTTGCAAGATAGCTATCTTGATGCTATCCCTTTTATGAAGTTTTATTATCCTCATGACATTTTGTATGAAACTACTCTTCCCATTGAACCAACCTCACTAAGCATACAAGACTATGACTTTTCTGATTGGAACGAAATCGATGGTTCTGATCATAAACCTGTGTTTTTATCATGCAATGATGGAGAAAGTGTAAGTGAAATGAAGGAGGATTTGAATGCTAAGAAATGCAGAGAAGAGAAAATTAGTAGCAGTGCGAAAATGTTGTCAAGAACAACTGTTTCTCAATACTTTTACATGCCAATATCAAAAGCAGCAAGAGAGCTCAATGTGGGCCTCACACACTTGAAGAAAAGGTGTAGGGAGTTAGGAATTCAGAGGTGGCCACATAGGAAGCTGATGAGTCTGCAAACCCTTATAAAGAATATACAAGAGCAAGGAGAGGCCGAGGGGCATGAAAATGATGAAAAATTAAGGGCTGCCATTGAGATGTTGAAGAGAGAAAAAAGGAAGGTGGAGGAAATGCCGGATTTGGAACTTGAGGATAATACAAGAAGGCTTAGACAAGCTTGTTTTAAGGCTAACTACAAGAAGAGGAAACTCGTGGGCATGAGGTTCATTGAACCTGAGTCTTCTCTTAGTGGTCTATCCAACAAGTATTGA 807 0.3953 MENQQLTFWKSNYDIDDYYPFAPTCQFSSYDYCGWGSAADGYHWPHEFPLQDSYLDAIPFMKFYYPHDILYETTLPIEPTSLSIQDYDFSDWNEIDGSDHKPVFLSCNDGESVSEMKEDLNAKKCREEKISSSAKMLSRTTVSQYFYMPISKAARELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNIQEQGEAEGHENDEKLRAAIEMLKREKRKVEEMPDLELEDNTRRLRQACFKANYKKRKLVGMRFIEPESSLSGLSNKY* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1637 268 PANTHER PROTEIN RKD1-RELATED 42 255 - -
Gso6g1637 268 PANTHER PROTEIN RKD4 42 255 IPR044607 GO:0003700
Gso6g1637 268 Coils Coil 203 223 - -
Gso6g1637 268 Pfam RWP-RK domain 137 184 IPR003035 -
Gso6g1637 268 ProSiteProfiles RWP-RK domain profile. 117 205 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1637 Gso-Chr6 17340184 17341504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1637 123 252 AtRKD Transcription Factor Family AT1G18790 62.879 1.88e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gso6g1637 RWP-RK 3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1637 - - gmx:100815615 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1637 6 17340184 17341504 Gso6g1637 6 17340184 17341504 ECH
Gso4g1415 4 41729916 41739862 Gso6g1637 6 17340184 17341504 GST
Gso5g0221 5 2288707 2289966 Gso6g1637 6 17340184 17341504 PCT
Gso17g0842 17 7929105 7930260 Gso6g1637 6 17340184 17341504 PCT