Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1628 ATGGCAGAGCAAGACAAGGTGATCCTACACGGGATGTGGGCCAGCCCTTATGCCAAGAGGGTGGAATTGGCCCTTAATTTTAAGGGCATACCCTATGAGTATGTTGAAGAAGACTTGAGAAATAAGAGTGATTTGCTTCTAAAGTACAACCCTGTTCACAAGAAGGTTCCTGTACTTGTTCATAATGGAAAGGCCATTGCTGAATCCATGGTGATCCTTGAGTATATTGATGAAACATGGAAAGATGGTCCTAAACTGCTTCCAAGTGATTCTTACAAACGAGCCCAAGCTCGATTCTGGTGTCATTTCATCCAGGATCAGTTAATGGAGAGCACTTTTCTAGTAGTCAAAACTGATGGAGAAGCACAACAAAAGGCCATTGACCACGTGTATGAGAAACTGAAAGTGCTAGAAGATGGAATGAAGACCTATCTGGGAGAAGGCAATGCTATTATTTCTGGTGTTGAAAACAACTTTGGAATCCTTGACATTGTGTTTTGTGCTTTATATGGTGCCTACAAGGCTCATGAAGAAGTTATTGGCCTCAAGTTCATAGTGCCAGAAAAGTTTCCTGTGTTGTTTTCTTGGTTGATGGCTATTGCTGAGGTTGAAGCTGTGAAAATTGCAACTCCTCCACATGAAAAAACAGTGGGAATTCTTCAGTTGTTCAGGCTGTCTGCACTGAAATCTTCTTCTGCCACAGAATGA 708 0.4195 MAEQDKVILHGMWASPYAKRVELALNFKGIPYEYVEEDLRNKSDLLLKYNPVHKKVPVLVHNGKAIAESMVILEYIDETWKDGPKLLPSDSYKRAQARFWCHFIQDQLMESTFLVVKTDGEAQQKAIDHVYEKLKVLEDGMKTYLGEGNAIISGVENNFGILDIVFCALYGAYKAHEEVIGLKFIVPEKFPVLFSWLMAIAEVEAVKIATPPHEKTVGILQLFRLSALKSSSATE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1628 235 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Gso6g1628 235 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Gso6g1628 235 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 230 IPR045073 -
Gso6g1628 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Gso6g1628 235 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Gso6g1628 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 228 IPR010987 -
Gso6g1628 235 SFLD Main (cytGST) 3 227 - -
Gso6g1628 235 SFLD Main.3: Omega- and Tau-like 3 227 IPR045073 -
Gso6g1628 235 Gene3D - 87 230 - -
Gso6g1628 235 Gene3D Glutaredoxin 1 86 - -
Gso6g1628 235 SUPERFAMILY GST C-terminal domain-like 78 222 IPR036282 -
Gso6g1628 235 CDD GST_N_Tau 7 80 - -
Gso6g1628 235 PANTHER GLUTATHIONE S-TRANSFERASE U9-LIKE 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1628 Gso-Chr6 17174538 17176371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1628 3 232 Glutathione S-transferase Gene Family AT1G74590 44.783 3.38e-74 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1628 K00799 - gmx:547581 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1628 6 17174538 17176371 Gso6g1628 6 17174538 17176371 ECH
Gso4g1422 4 42001501 42023454 Gso6g1628 6 17174538 17176371 GST