Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1626 ATGGAGGGAGGTAGTGATGACTTCCACTACCACCACCATCTCCATAACCATAACCACCACCGACAAAACTTCCCATTCCAACTACTTGAGAAGAAAGAAGATCCCCAAGACCCTTCTTCTTGCTCCACCTCCTCCCCATACCCTTCCTTAGCCATCTCAGCTGAACCCTCTACTTCCAACAACAACAACCAACTCCTCCCCACACCCTCCTCCGAACCCTCCCCCAAAAAACCACCCCCTAAAAGAACCTCTACCAAAGACCGGCACACGAAGGTCGATGGCCGCGGCCGTCGAATTCGAATGCCGGCTCTCTGTGCCGCCAGGGTGTTCCAGCTCACGCGTGAGCTGGGACACAAGTCTGACGGCGAGACGATCGAGTGGCTTCTCCAGCAGGCGGAGCCATCCGTCATCGCCGCCACCGGAACCGGCACTATCCCGGCCAACTTCACCTCCCTCAACATCTCCCTCCGCAGCTCCGGCTCCTCCATGTCTGTCCCTTCCCAGCTTCGATCCAGCTACTTCCACAACTCAAGCTTCTCCCTCCAACCTAGAAGAAGCTTATTCCTAGAAAACACCAACACCAACACTCCCAACACAACAACAACAACACTCCTCAATTTCCAATCCAACAACAACAACAACCCCATCTTCCAAATCCAACCCAAGCACGAATTGCGCGAATCTTCATCACTAGACCTGTCCTCAGAGAACAACAACAACAACGAAGAGGGTAATTTGGGAAGAAAAAGAAGACCCTTGGAGCAAGACCTTTCCTCAACTATGCAACACCAAGTTGGAATTGGAAACTATTTGATGCAATCAAGCACTACTTCGGGGACAATTCCGGCGAGCCACCACGCTCAAATTCCGGCGAATATATGGATGCTAGCGAATTCAAATAGCCACCACAACCAAGGTGGTGGTGTGAGTGTGAGTGGTGGTGAAGCTCCTCCTTTGTGGACATTCCCTGGTGGTGTGAGTAACAGTGCTTTGTATAGAGGAACCATGTCAAGTGGGTTGCATTTCATGAACTTTCCAACCCCAATGGCACTTTTGCCAGGTCAACAATTAGGGTCTTCTGGGATTGGTGGTAACATGAACGAAGGGCATTTGAACATGCTTTCGGGGCTAAACCCTTATCGGACGACGGTGATCGGAGTTTCGGAGTCTCAGGCGAGTGAGTCACAACAGTCCCATCATGGTGGAAGCGAGGATCAACATGAATGA 1227 0.5134 MEGGSDDFHYHHHLHNHNHHRQNFPFQLLEKKEDPQDPSSCSTSSPYPSLAISAEPSTSNNNNQLLPTPSSEPSPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFHNSSFSLQPRRSLFLENTNTNTPNTTTTTLLNFQSNNNNNPIFQIQPKHELRESSSLDLSSENNNNNEEGNLGRKRRPLEQDLSSTMQHQVGIGNYLMQSSTTSGTIPASHHAQIPANIWMLANSNSHHNQGGGVSVSGGEAPPLWTFPGGVSNSALYRGTMSSGLHFMNFPTPMALLPGQQLGSSGIGGNMNEGHLNMLSGLNPYRTTVIGVSESQASESQQSHHGGSEDQHE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1626 408 MobiDBLite consensus disorder prediction 38 70 - -
Gso6g1626 408 MobiDBLite consensus disorder prediction 389 408 - -
Gso6g1626 408 MobiDBLite consensus disorder prediction 224 259 - -
Gso6g1626 408 MobiDBLite consensus disorder prediction 79 98 - -
Gso6g1626 408 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 15 407 - -
Gso6g1626 408 Pfam TCP family transcription factor 83 251 IPR017887 -
Gso6g1626 408 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Gso6g1626 408 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 407 IPR005333 GO:0003700
Gso6g1626 408 MobiDBLite consensus disorder prediction 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1626 Gso-Chr6 17134641 17136584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1626 70 408 TCP Transcription Factor Family AT3G47620 41.966 1.88e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso6g1626 TCP 2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1626 - - gmx:100792383 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1626 6 17134641 17136584 Gso6g1626 6 17134641 17136584 ECH
Gso4g1426 4 42101264 42103228 Gso6g1626 6 17134641 17136584 GST