Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1620 ATGGATTCTCTGAAGATGTTGAAAGGTTATGGTAAAGTAGAACACCACCTCGAAGATCATCGTAACCCCAAACCCAAACCTAAATTCTCCAAGCCCTTCATCGCCGCAATTTCCGTCTTCGCAATCCTCTTCCTTACTCTCACCTTCGCATTCGCCCTAGCATCCATGCTGCACCACAGTCACCACACCGAGTCACAACAACAACTTCTCAACTCGGCCGAGTCGATCCGAGTCGTCTGCAACGTCACTCGCTTCCCTGGCGCGTGCCTCGCCGCCATCCCGCCCTCCGCCAACGCCACAAACCCCCAAGCGATCCTCTCCCTCTCCCTCCGCGCGTCGCTCCACGCGCTCCATAGCCTCAATTCCTCGCTAGGAACGAAGAATTCACGCGCGCTCGCCGACTGCAGGGACCAGCTGGACGACGCGTTGGGTCGACTCAACGACGCGCTGTCGGCCGCGGCGGCGCTCACGGAGGCGAAGATCTCCGACGTTCAGACGTGGGTGAGCGCGGCGATCACCGACCAACAAACGTGCCTCGACGGATTGGAAGAGGTTGGTGACGTGGCAGCGATGGAAGAGATGAAGAAAATGATGAAGAGGTCGAACGAGTACACCAGTAACAGTTTGGCTATTGTCGCTAATATTCGCAACTTGTTACAACGGTTCCACATGGCGCTACATTGA 684 0.5643 MDSLKMLKGYGKVEHHLEDHRNPKPKPKFSKPFIAAISVFAILFLTLTFAFALASMLHHSHHTESQQQLLNSAESIRVVCNVTRFPGACLAAIPPSANATNPQAILSLSLRASLHALHSLNSSLGTKNSRALADCRDQLDDALGRLNDALSAAAALTEAKISDVQTWVSAAITDQQTCLDGLEEVGDVAAMEEMKKMMKRSNEYTSNSLAIVANIRNLLQRFHMALH* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1620 227 Pfam Plant invertase/pectin methylesterase inhibitor 75 211 IPR006501 GO:0004857
Gso6g1620 227 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 215 IPR035513 -
Gso6g1620 227 CDD PMEI-like_3 79 215 - -
Gso6g1620 227 PANTHER PECTINESTERASE 3 222 - -
Gso6g1620 227 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 214 IPR006501 GO:0004857
Gso6g1620 227 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 217 IPR035513 -
Gso6g1620 227 SMART PMEI_2 71 211 IPR006501 GO:0004857
Gso6g1620 227 PANTHER PECTINESTERASE 1-LIKE 3 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1620 Gso-Chr6 17026826 17027781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1620 1 227 Carbohydrate Esterase AT1G53840 33.200 2.92e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1620 - - gmx:100789567 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1434 4 42233847 42234266 Gso6g1620 6 17026826 17027781 GST