Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1619 ATGTCTGGCCAGAGAAACTTCAGAACTTCAAAATTCACGGAAAGTGAGATTAATGATCTGATGTTGAGGCTACAAGCACTGCTACCACAACTAAACCAAACAAGAAACTCAAGGGCATCAGAAAGCTTGATGAAGATCATGAAGGAAACTTGCTCTCACATCAATAGGCTACAGAATGAGGTGAAAGACCTTGGTGAAAGGCTAGCAGAGCTGATTGATTCTGTAGACCTTAGTGACATTGACGAGGAGTGTCTTACAAGACTTTTACAACAATAA 276 0.4058 MSGQRNFRTSKFTESEINDLMLRLQALLPQLNQTRNSRASESLMKIMKETCSHINRLQNEVKDLGERLAELIDSVDLSDIDEECLTRLLQQ* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1619 91 Gene3D - 13 83 IPR036638 GO:0046983
Gso6g1619 91 PANTHER DNA BINDING PROTEIN 1 91 - -
Gso6g1619 91 PANTHER DNA BINDING PROTEIN 1 91 IPR044172 -
Gso6g1619 91 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 72 IPR036638 GO:0046983
Gso6g1619 91 Coils Coil 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1619 Gso-Chr6 17023862 17025196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1619 2 76 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 44.737 7.19e-14 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1619 - - gmx:100810266 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1435 4 42244125 42245332 Gso6g1619 6 17023862 17025196 GST