Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1614 ATGGAGGTGTTGGGGAAGGGTAGCGTGGGGACTTCGTATAAGGCGGTGCTGGAGGAAGGAACCACCGTGGTGGTGAAGAGGCCGAAGGATGTTGTGGTGATGAAGAAAGAGTTTGAGATGCAAATGAAGGTTCTGGGGAAGATTAAGCACGAGAATGTGGTTCTTCTCAGAGCCTTTTACTTTTTCAAGGACGAGAAATTGCTCGTTTATGATTACATGTCCGCTGGGAGCTTGTCTGCGCTACTACACGGTACTAGAAACTACTGA 267 0.4831 MEVLGKGSVGTSYKAVLEEGTTVVVKRPKDVVVMKKEFEMQMKVLGKIKHENVVLLRAFYFFKDEKLLVYDYMSAGSLSALLHGTRNY* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1614 88 SUPERFAMILY Protein kinase-like (PK-like) 2 86 IPR011009 -
Gso6g1614 88 PANTHER OS05G0588300 PROTEIN 2 86 - -
Gso6g1614 88 PANTHER OS05G0480400 PROTEIN 2 86 - -
Gso6g1614 88 Gene3D Phosphorylase Kinase; domain 1 1 72 - -
Gso6g1614 88 ProSiteProfiles Protein kinase domain profile. 1 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1614 88 Pfam Protein kinase domain 2 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1614 Gso-Chr6 16975466 16980350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1614 2 86 Receptor kinase-like Gene Family AT4G23740 64.706 1.41e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso6g1614 Pkinase 8.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1614 - - gsj:114416529 164.851