Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1592 ATGGGGTGGGTGGCGAATCGGTGGACGGGCGTCGCCGCCGCCATATGGATCCAGTGGAGCTGCGGCGCATCGTACACCTTCAGCATCTACTCCTCCGTGCTCAAGTCCACGCAGGGCTACGACCAATCCACGCTCGACACCGTCTCTGTCTTCAAGGACATCGGCGCCAATTTCGGCGTCCTCTCCGGCCTCCTCTACTCCGCCGTCGTCCCCTACACAACCCACCGCGCCTCCGCCGCCGCCAAGTCCAAATGGGCATCGCTCGGCGGGCCCTGGGTCGTCATCGCGGCCGGCACCGTCCAGTGCTTCGCGGGCTTCATCTTCATCTGGGCCTCCGTCGTGGGCCTTATAAGCCCGCCGCCCGTGCCGGTCATGTGCTTCTTTGCGTGGCTCGCGTCCAACGGCCAGACCTTCTTGAATACCACCAATGTCGTCACCGGCTTGCGCAATTTCCCCGAGTACAGCGGCACCATCATTGGTATCATGAAGGGATTTCTTGGACTGAGTGGAGCTATCTTGATCCAAATTTACCATACGTTTTTTGATGGGGACCCAGCAACATACCTTTTGATGCTTGCAGCGTTGCCTTCATTCATCTGCGTGTTGCTTATGTTCTTGCTGAGGATATATGAAGTGCATGGCAGTGATTACAAGAAGCATTTGGATGGTTTCTCTGTGGTTACTGTGATTATTGTAGCCTATCTCATGTTCATAATAATTTTACAGAACTTAGTTAGTTTACCATACTGGGGACGGATGTTTGCATTTGTGATTCTTATGGTTCTGCTAGCAACGCCTTTTGGAATTGCTATCAAGGCTCATTGGGAAGAATCACGGAAATTTGCGCAATCCTACACAATTGGGAGGAGTTCTTCTACAAATAAGGGTACTACTTCCTCCAGTTATTCTGCATCAGTGGATCAAGTGGAGTACCATGAGTTGCCTAGTGATGAGGGGCAGGAACAAGTGACTTCAGATGACAAATTGCCCCGTGAAGAAGAAAAGAACCTCTGGCAAGCTATGTGCACGGTTGATTTTTGGATGTTGTTTGTGATCATGATATCAGGATTGGGTTCTGGGCTTGCAACTATAAATAATATGAGCCAAATAGGACAATCCCTTGGCTATAGTACCATAGAGATTAATAATTTGGTGTCACTATGGAGTATGTGGAACTTCCTTGGTCGTTTTGGAGGTGGCCATGTATCAGATTATATCATGCACAGAAAAGGTTGGCCCAGGCCACTGTTGATGACAGCAACTCTAGGGATAATGATTCTTGGCCATTTAATTATAGCATCTGGTTTCCGTGGAAATTTGTATTTGGGTCCTGTCCTGGTAGGTATCTGCTATGGTGCACATTGGTCCTTGATGCCCACAATCACTTCTGAGATATTTGGTGTAAAGCATATGGGTACCATCTTCAATACTATTGCTGCAGCAAGTCCTCTTGGATCGTATATACTTTCTGTCAGAGTTGTTGGATATATTTACGACAAGCAAGCCGATAAAGAAGATAATTTGTGCTTTGGCATCGACTGTTTCATGCCCTCATTTTTTATCCTGGCAGGTGTAGCTCTTCTTGCATTTTTGGTTGGTTTGGCATTGTTCTTCCGGACCCGAAGGTTCTATAAGCAAGTTGTGCTTAGAAGATTAAAACATTATGCAAGATGA 1674 0.4779 MGWVANRWTGVAAAIWIQWSCGASYTFSIYSSVLKSTQGYDQSTLDTVSVFKDIGANFGVLSGLLYSAVVPYTTHRASAAAKSKWASLGGPWVVIAAGTVQCFAGFIFIWASVVGLISPPPVPVMCFFAWLASNGQTFLNTTNVVTGLRNFPEYSGTIIGIMKGFLGLSGAILIQIYHTFFDGDPATYLLMLAALPSFICVLLMFLLRIYEVHGSDYKKHLDGFSVVTVIIVAYLMFIIILQNLVSLPYWGRMFAFVILMVLLATPFGIAIKAHWEESRKFAQSYTIGRSSSTNKGTTSSSYSASVDQVEYHELPSDEGQEQVTSDDKLPREEEKNLWQAMCTVDFWMLFVIMISGLGSGLATINNMSQIGQSLGYSTIEINNLVSLWSMWNFLGRFGGGHVSDYIMHRKGWPRPLLMTATLGIMILGHLIIASGFRGNLYLGPVLVGICYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVRVVGYIYDKQADKEDNLCFGIDCFMPSFFILAGVALLAFLVGLALFFRTRRFYKQVVLRRLKHYAR* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1592 557 CDD MFS_Mch1p_like 7 529 - -
Gso6g1592 557 Gene3D MFS general substrate transporter like domains 337 548 IPR036259 -
Gso6g1592 557 SUPERFAMILY MFS general substrate transporter 231 542 IPR036259 -
Gso6g1592 557 Pfam Nodulin-like 7 270 IPR010658 -
Gso6g1592 557 SUPERFAMILY MFS general substrate transporter 6 209 IPR036259 -
Gso6g1592 557 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 555 - -
Gso6g1592 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 344 557 IPR020846 GO:0022857
Gso6g1592 557 Pfam Major Facilitator Superfamily 349 542 IPR011701 GO:0022857|GO:0055085
Gso6g1592 557 PANTHER F25A4.25 PROTEIN 5 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1592 Gso-Chr6 16615728 16618868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1592 1 554 Nodulin-like Gene Family AT1G74780 56.137 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1592 - - gmx:100799596 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1592 6 16615728 16618868 Gso6g1592 6 16615728 16618868 ECH
Gso4g1469 4 43251184 43254581 Gso6g1592 6 16615728 16618868 GST