Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1586 ATGTCCCAAGGATCTCCCCCTCAAGACACCACCGAACCCTCGCCGGAATCCGATTCGCGTAAGGAGCAAACAACCGCCACAACCACCACCACCGCCGTTACCGCTGCCGTAGATGCTGGTGCTCCTCCCGCCCCCACTCGGAGTCGCCCCTCCCGCGCCTGCACTATTCGCGCGGCGGCGCGCCTCCTCTCGGCATCGCAGCCGGCGAGGCCGAAGGCCGCCAGGAGGGAGCCCCGCCGCGAGGGGTCGCCGTCATCGCCGCCGCCGCCGCCGCAGCTGCAGCAATGCAGCAAGATCGTGACGCCGCTGGTGGAACCGCCCCCGGCGGCGCAGTTGCCGCGCTACAACCTCCGGTCCATGTGGGAATTGGCTTCAATACTCAATTTTTTGAATCTGTTTAGGCCTCTTTTGAATATTTCAGTAGAATTTTCGGCTGAAGAGTTTGAGACGGCTTTGCTCACCCCAAATGACACATTGGGCGATATACATGTGCCTTTGCTAAAGGCAATTCCTCCCATTACGCGAATGGCACTCTCACGTGATACTTGGATAACCGTATTATGCAGAAAATTGAGAGATTGGTGGCAATGGGTTGCTGATGGGGATCTTCCTATTGTTGCTTCACATGGAATGGAGGTTGAAGTATATAAATCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCAGAGGTTACATTGACAGATCAATCAAACATGGCATTCCACTTTCAACATTCCGTAAGGAGCGTATTGGCGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCAAATTATTGGTCATAGGTTGTATCGGGAAATAAGGAAAACTGAGGTGGTTCAAATGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTTTTTCTAATACAACCTACCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTCCAGGATGTTTCTGAGAAGCTTTTCACAAGTAAAAACAGAATGGAGGCATCTGTTGGGAAGAAGGTGAAAATAGACATGCTCCCTGAAATCGAGAAAGTTCACAAGAGAAAGGAGAAGTTGCTGAAAAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGATTGCCCCTGGGCGTTCACTTCGTGATAGAAAACCTGTTACCTACACTTTTGATGATTACGATCGATCCATCAATGAAGCAATTAAGATAACCAAACGGAAACCACCATCCCCAGAACTTATACCCAGGAGAGAAGCAGGAGCAAAACCTGAAGCTTTAACCAATGGTAAATGGAGTGGTCCTTCACATGACCCTCAAGACCTGAATTTTGGCATGCCATCTCCAAAATCACCTGACTCCGATGATATGGAGGAAGAGAATCAAACTGACATGTTGGACTTGGATCGAAGCAATCGGCGAAGACAGAAGCCTAAACGGTATTCGGAGAAAGACTTTGTTGAAGCACTGTCGGATAATGAGGCTGACTATGACAGCGATGATGATATTGTTGGAGAAGCCGTGTATGATGAAGAGTATCTCCAGAAACGTAAGCAGAGAAGGAAGGCTTCTAGTAGCTCTGGCTCTGAAGGAGATGAAGAATATCATTGGGATGAAGATCATGTTGAAGACGAAGAAGATTCCTTGAGTGTCAGTGAGGATAGTGACAAGCCCCGTAAATTCAAGCGACTGGCAGGCCGTACTAGGAGGGAAACTAAAGTCAGGTCTGTGGGTGAGATTCAATCAGGTCTAAGACGTAGTAAGAGGGCAAAAACTAAAAGCCGTATAAATTACCGAAGGTACGAGATATCTGATTCAGAGACAGAGTTCATTAAATCTGACAAGTCCAATGCATCAGACGATCACTCAGATCCTACTGAGAATGGGGAGTATATGATGGAAAGTGAAGACTCCGACGGCAATGACGAGGAAGAACAAGAAACCAAAGCAGTTGAGCCCGTTACTTACCCTGCAGAAGAAAATAACCAATCTCCTGCTGTAGAGGAGAATGAACAAAACCAAAACCTGCCTCCTGAAAAATCTAGTAGTCCAGGTCAGGAGGAAGTTGAGGGCACCGCAAAGCGACGTTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGATGATGGTCCAAATACAACAACACTGAAAGATGAAGGCGGCAATGATGATAATTGA 2211 0.4717 MSQGSPPQDTTEPSPESDSRKEQTTATTTTTAVTAAVDAGAPPAPTRSRPSRACTIRAAARLLSASQPARPKAARREPRREGSPSSPPPPPQLQQCSKIVTPLVEPPPAAQLPRYNLRSMWELASILNFLNLFRPLLNISVEFSAEEFETALLTPNDTLGDIHVPLLKAIPPITRMALSRDTWITVLCRKLRDWWQWVADGDLPIVASHGMEVEVYKSLDPGVRVVILKALCDIRVEQEDIRGYIDRSIKHGIPLSTFRKERIGGDSHGISYWYEDDQIIGHRLYREIRKTEVVQMKKGKPRGSQVFSNTTYQWETVATNFDEFQDVSEKLFTSKNRMEASVGKKVKIDMLPEIEKVHKRKEKLLKKQHRQALLLDNFLGVDGIAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPELIPRREAGAKPEALTNGKWSGPSHDPQDLNFGMPSPKSPDSDDMEEENQTDMLDLDRSNRRRQKPKRYSEKDFVEALSDNEADYDSDDDIVGEAVYDEEYLQKRKQRRKASSSSGSEGDEEYHWDEDHVEDEEDSLSVSEDSDKPRKFKRLAGRTRRETKVRSVGEIQSGLRRSKRAKTKSRINYRRYEISDSETEFIKSDKSNASDDHSDPTENGEYMMESEDSDGNDEEEQETKAVEPVTYPAEENNQSPAVEENEQNQNLPPEKSSSPGQEEVEGTAKRRFLDLNELAPSSGFDDGPNTTTLKDEGGNDDN* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1586 736 MobiDBLite consensus disorder prediction 639 655 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 579 595 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 518 544 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 411 736 - -
Gso6g1586 736 PANTHER REMODELING AND SPACING FACTOR 1 23 732 IPR028938 GO:0006355|GO:0031213
Gso6g1586 736 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 23 732 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 501 517 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 20 35 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 411 429 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 605 638 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 1 95 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 473 500 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 666 697 - -
Gso6g1586 736 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1586 Gso-Chr6 16477480 16487068 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gso6g1586 DDT 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1586 - - gmx:100796430 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1586 6 16477480 16487068 Gso6g1586 6 16477480 16487068 ECH
Gso4g1475 4 43393442 43403846 Gso6g1586 6 16477480 16487068 GST
Gso5g0261 5 2717826 2726647 Gso6g1586 6 16477480 16487068 PCT
Gso17g0803 17 7493131 7501764 Gso6g1586 6 16477480 16487068 PCT
Gso6g1586 6 16477480 16487068 Gso5g0261 5 2717826 2726647 PCT
Gso6g1586 6 16477480 16487068 Gso17g0803 17 7493131 7501764 PCT