Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1574 ATGTCAGCACCTAGTCATGCAATTGTAAAGGCTGTGGCTGCCACAGCTGGGGCTATGTTACTTATTGCTGCGATATTTGTTTACTTTTTTTACAAATTTGTTCTTGCTAGATACCACCAGAGACACAAAGTTGGTGCAAGTTTGCTTCGAGAATCAGGAGTGAACCTTGAGTATATTAACAAAGTTGGTGGCAATGTGAAGGGACTAATTGTTGAAGAAAATGGGGTGGATGTTCTTTATGTGATGGACACAGAAAGAAGACCATTGATTACTGGTTTTCCAAATAGTATATTCAATCCAAGTTACGAACTTGATGAGGAAGAAAAGAGAATAGATATAATGGTCCAAAGGTCCAAAGTATCCAAGCCTGAAATTCCAGAGGCATGTGAATCTCCTAGTGTTGTTGGTCATGAGAATCAAGTTAAGCCAGTGTCACAAGCATCATCAATTTCAACATCACTAACACCAAGACAAAACTTGCCACAATCACCTCAACCACTACCACAATCTTCACCAATGATTGATGAGAACAAGAAAACTCAACCATCACCACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCAACTCGTCCTCCACCACCACCACCTGGTCCACCTCCACTTCCTAAGGCCAGTGGCTTCATTTCATCACTGAAACCCCCACCTGCTCCCAAAGGGAAAACAAACATAAGAAGCACTAAAGAGGGTATGGTAGGGGAGAGTTCAAGAGAGAAGGGTGTTGGTCAAACAAGGCTGAAGCCTCTACATTGGGATAAGGTTGCAGCAAATGTTGATCATTCAACTGTGTGGGATCAGATCAATGATGGCTCTTTCAGGTTTGATGATGAACTAATGGAATCACTCTTTGGATATTCAAGCAGCTATAAAACCCAAGAAAGAAACAGAACTCTTTCCACTTTGGCCAAGTCCAATTCCAATGCACCAGCTCAAATATTCATTCTTGAGCCAAGAAAATCTCAGAACACTGCAATTGTGCTAAGATCACTTGCTATTTCTCGCAAGGGAATCTTGGATGCAGTTCTTGATGGTCAGGGACTAAGTGTTGAGACACTAGAAAGACTAACTAAAATAGCTCCCACACAAGAAGAGGAAGCCAAAATCATCCAATTCAGTGGCAACCCGGATCAGCTTGCTGATGCTGAATCTTTCCTATACTTCATTCTTAAAGCAGTTCCAACAGCATTCAACCGTTTGAAAGCAATGCTTTTCCGGTCGAGTTACAATTGCGAAGTTCTTCAGCTCAAGGAACAGCTACAAGCACTTGAAATGGGTTGCAAGGAACTGAGAACTAGTGGCCTGTTTTTGAAACTCCTTGAGGCCATTCTCAAAGCTGGGAACCGGATGAATGCCGGAACATCAAGAGGCAATGCACAAGGTTTCAACTTGAGTTCTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAATCAGAAGGAAAAAGACAAGCTATCTATCAAAAGCACAAACTTCACATAAGCAATGGTGAAACAAGCAATGTGAATAATAGACCTTATTCATATAGCCTCATACAACAAGAGGCAGATAAAGAACATGTATTGCTTGGTTTGCAAGTATTAGGTGGGCTAAGTGAAGAGTTATCTGAAGCAAAGAAAGCAGCTAGTCTTGAGTATCATAATTTCATCACTATGTGTTCAACTCTCAATGCTCATGTTAGTGAAATCAGACAGATTATAACATGCTGTGGCAATATTAGGAGTGGTGGATTTATCAATGAAATGAAAGGGTTCCTAGAGGAATGTGAGGGAGAACTTGACGTGGTGAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAAAACAAACGAGTACTATCTAGCAGGAGCATCTAAAGACAACATGGTAAACCCTTTTCAACTGTTTGTTATTGTGAAGAGTTTTGTTGACATGGTAGATAAGGCTTGCATAGAACTAAAAAAGAAGGTAGAAAAGAAGAATATTGTGGGAGGAGAGGCTGTGTCAACAACACCACCTTTGTCACCATCAAAGAGGACGCCGCTCAGATTCCCTAACTTTGATTTGTATTTTCTATCGAATGTGTCAGAAACTACATCTTCTAGCCAATCAGAAGATGATTTCTGA 2172 0.413 MSAPSHAIVKAVAATAGAMLLIAAIFVYFFYKFVLARYHQRHKVGASLLRESGVNLEYINKVGGNVKGLIVEENGVDVLYVMDTERRPLITGFPNSIFNPSYELDEEEKRIDIMVQRSKVSKPEIPEACESPSVVGHENQVKPVSQASSISTSLTPRQNLPQSPQPLPQSSPMIDENKKTQPSPPPPPPPPPPPPPPTRPPPPPPGPPPLPKASGFISSLKPPPAPKGKTNIRSTKEGMVGESSREKGVGQTRLKPLHWDKVAANVDHSTVWDQINDGSFRFDDELMESLFGYSSSYKTQERNRTLSTLAKSNSNAPAQIFILEPRKSQNTAIVLRSLAISRKGILDAVLDGQGLSVETLERLTKIAPTQEEEAKIIQFSGNPDQLADAESFLYFILKAVPTAFNRLKAMLFRSSYNCEVLQLKEQLQALEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSSLRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAIYQKHKLHISNGETSNVNNRPYSYSLIQQEADKEHVLLGLQVLGGLSEELSEAKKAASLEYHNFITMCSTLNAHVSEIRQIITCCGNIRSGGFINEMKGFLEECEGELDVVKEEQTRIMELVKKTNEYYLAGASKDNMVNPFQLFVIVKSFVDMVDKACIELKKKVEKKNIVGGEAVSTTPPLSPSKRTPLRFPNFDLYFLSNVSETTSSSQSEDDF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1574 723 ProSiteProfiles Formin homology-2 (FH2) domain profile. 244 687 IPR015425 -
Gso6g1574 723 MobiDBLite consensus disorder prediction 138 160 - -
Gso6g1574 723 MobiDBLite consensus disorder prediction 124 253 - -
Gso6g1574 723 Pfam Formin Homology 2 Domain 251 661 IPR015425 -
Gso6g1574 723 PANTHER FORMIN-LIKE PROTEIN 2 719 - -
Gso6g1574 723 SMART it6_source 246 676 IPR015425 -
Gso6g1574 723 SUPERFAMILY Formin homology 2 domain (FH2 domain) 200 675 - -
Gso6g1574 723 Coils Coil 420 440 - -
Gso6g1574 723 MobiDBLite consensus disorder prediction 179 212 - -
Gso6g1574 723 Gene3D Formin, FH2 domain 265 678 IPR042201 -
Gso6g1574 723 MobiDBLite consensus disorder prediction 239 253 - -
Gso6g1574 723 PANTHER FORMIN-RELATED 2 719 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1574 Gso-Chr6 16319130 16322000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1574 8 721 FH2 protein (formin) Gene Family AT1G70140 39.113 7.26e-151 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1574 - - gmx:100791689 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1574 6 16319130 16322000 Gso6g1574 6 16319130 16322000 ECH
Gso4g1489 4 43643960 43646819 Gso6g1574 6 16319130 16322000 GST