Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1573 ATGGCTGCCGCCGGCGATCTTTTCAGGCATGGTTTGCCGGAAGTTGGTGGTGCCGGGAAGTTACACGTGCTTGCTGTTGATGACAGCCACGTGGACCGCAAGGTGATCGAGCGGTTGCTCAAAATCTCGTCTTGCAAAGTGACGGTGGTGGAAAGTGGTAGCAGGGCTCTACAGTATCTGGGGTTGGATGGAGAAAAAAGTTCCATTGGTTTTGATAGTGTGGATGTTAATTTGATAATGACGGATTATTCCATGCCGGGGATGACAGGATACGAATTGCTCAAAAAGATTAAGGAGTCATCTGTTTTTAGAGAGGTTCCAGTGGTGGTTATGTCGTCTGAGAATATCTTGACCAGAATTGATAGTTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTCAAGTTGTCAGATGTAAAACGCGTAACAGATTTCATCATGCGAGGCGAAGGGATGAAAGGAGTAAAAAGATCTAAAAAAAGAAGCCGATCAGATGATTGCATTCCATCTCTATCAACTGCATTTGCATCAGTTTCTCATCCATGTGATCTATCATCACCTCCATCACCATGTGTATCGCAATCGAAGAAATCTAGATTGAGCATATAG 615 0.4472 MAAAGDLFRHGLPEVGGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGLDGEKSSIGFDSVDVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGMKGVKRSKKRSRSDDCIPSLSTAFASVSHPCDLSSPPSPCVSQSKKSRLSI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1573 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 16 202 - -
Gso6g1573 204 Pfam Response regulator receiver domain 23 142 IPR001789 GO:0000160
Gso6g1573 204 Gene3D - 20 181 - -
Gso6g1573 204 SMART REC_2 21 145 IPR001789 GO:0000160
Gso6g1573 204 MobiDBLite consensus disorder prediction 181 204 - -
Gso6g1573 204 ProSiteProfiles Response regulatory domain profile. 22 149 IPR001789 GO:0000160
Gso6g1573 204 SUPERFAMILY CheY-like 20 150 IPR011006 -
Gso6g1573 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 202 IPR045279 GO:0009736
Gso6g1573 204 CDD REC_typeA_ARR 23 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1573 Gso-Chr6 16305575 16307927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1573 16 163 Response Regulator Gene Family AT5G62920 75.000 2.92e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso6g1573 Response_reg 7.7e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1573 K14492 - gmx:100819165 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1573 6 16305575 16307927 Gso6g1573 6 16305575 16307927 ECH
Gso4g1490 4 43652004 43654587 Gso6g1573 6 16305575 16307927 GST