Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1554 ATGAGTCTCAAACCCATATGGGTATTCTTCATTGCCATCTTTTTGTTTCTTCTAGTGGCCAATTCAGAAGAAGAAGAAGTGATCAAGGCCCTAGTCACGTTCATGGATAAATTGGCACCAGGAAATGTACCAAGAGACCCTATGTGGGGTTGGAACCTTAACTCAGATCCTTGCATTGATAAGTGGCATGGTGTGAAGTGCTACTCAGACAACAAATATGTTAAGAGTGTAATTCTTGAGAAATTCAACTTTGGTGGAGTTGTAGATGCTAGTTCTGTTTGCATTGCTAAGTCTCTTCGAATCCTTAGGCTGACGGACAACATTTTACATGATTCGATATCCGAGGATATAGGAAATTGCCAGTCCTTGACTCAATTGTTCTTAAGTGGGAACCAACTCTCTGGGGACCTTCCTATTTCAATTGGCAAGCTAAGTAACATGAAACGGCTGCATGTTTCCGACAATCACTTCACTGGAGAGCTTCCTAACATGGTTCATGTTTCGGGTTTGATATCCTTTTTTGCTCAAAACAACAACTTCACTGGGGAGATTCCTAGTTTTGACTTCTCCAACCTTGATGCCTTTAATGTCTCTAACAACAATTTACAAGGTCAAGTTCCTGATGTCAAAGGAAAATTCCATGAAGACAGCTTTTCTGGGAATCCTAACTTATGTGGAAAACCGCTTTCACAAGAATGTCCACCACCTGAAAAGAAGGACCAAAACTCATTCCCTAATGATTTGTCCATTTATTCAGGTTACTTAGTCCTTGGTTTAATTGTCCTGCTTTTCTTGACCTTCAAGCTTTTAAGTAAGCTCAAGATCAAAGAAAAAGCATTGGATGTTGAAAAGAAGGAAATGGCAGAAGAAACTGTTAGTGTTGCTGGCAAGGCTAGTGAAATATCCAATTCCATCGTGTCAAAGAATGGCACTGTGATTAGATCAGAGTGTTCCTTGACATCTTTGGAAAGTGGGATGACAACATCAGGCCTTGTTCTTCTTTCAAGTCGAACGCTTCGAGGATTGCAATTTGAGGACTTGCTTGGTGCCCCTGCTGAATTGATTAGGAGGGGAAAGCATGGAAGCCTCTACAAGGTTATGCTCGATAATGGGGTGTTGTTGGCAGTGAAGAGGATCAAGGATTGGGGGATTTCAAAGCAAGATTTTGAGAGAAGGATGAATTTGATAGCCCAAGCGAAGCATCCACGCGTATTGCCACCTGTTGCATACTATTGCTCTCAGCAAGAGAAGCTCCTAGCATATGAATATCTGCAGAATGGTAGTCTCTTCATGTTTCTCTATGGATCTCAAAGTGGCCACTCTTTTGACTGGAGAAGCAGATTAAATGTTGCTGCTAATATAGCCGAGGCTTTGGCATATATGCATGAGGAGTTTCTTGAGAATGGAATTGGACATGGTAACTTAAAGTCAAGTAACATTTTGTTTGACAAGAATATGGATCCATGCATAAGCGAATATGGCCTAATGATGGCAGAAAATCAAGATCAACTTGTCCCTTCCCATAACAAAGGCCTCAAAAGCAAAGATCTGATTGCAGCTACCTTCAAAGCTGATGTACATGCCTTTGGTATGATACTTCTCGAGCTTCTGACAGGGAAAGTAATTAAAAATGATGGATTTGATCTAGTCAAATGGGTGAATTCAGTGGTTAGAGAGGAATGGACGGTTGAAGTTTTTGACAAGTCCCTAATCTCACAAGGTTCTTCTGAAGAGAAGATGATGTGTTTGTTGCAAGTAGCATTAAAATGCGTAAATCCTTCTCCAAATGATAGGCCAAGTATGAGCCAAGTTGCAGTGATGACAAATTCTTTGATAGAGGAGGAAGAAAAATCCATATCCTTTGACACATGA 1872 0.4071 MSLKPIWVFFIAIFLFLLVANSEEEEVIKALVTFMDKLAPGNVPRDPMWGWNLNSDPCIDKWHGVKCYSDNKYVKSVILEKFNFGGVVDASSVCIAKSLRILRLTDNILHDSISEDIGNCQSLTQLFLSGNQLSGDLPISIGKLSNMKRLHVSDNHFTGELPNMVHVSGLISFFAQNNNFTGEIPSFDFSNLDAFNVSNNNLQGQVPDVKGKFHEDSFSGNPNLCGKPLSQECPPPEKKDQNSFPNDLSIYSGYLVLGLIVLLFLTFKLLSKLKIKEKALDVEKKEMAEETVSVAGKASEISNSIVSKNGTVIRSECSLTSLESGMTTSGLVLLSSRTLRGLQFEDLLGAPAELIRRGKHGSLYKVMLDNGVLLAVKRIKDWGISKQDFERRMNLIAQAKHPRVLPPVAYYCSQQEKLLAYEYLQNGSLFMFLYGSQSGHSFDWRSRLNVAANIAEALAYMHEEFLENGIGHGNLKSSNILFDKNMDPCISEYGLMMAENQDQLVPSHNKGLKSKDLIAATFKADVHAFGMILLELLTGKVIKNDGFDLVKWVNSVVREEWTVEVFDKSLISQGSSEEKMMCLLQVALKCVNPSPNDRPSMSQVAVMTNSLIEEEEKSISFDT* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1554 623 Coils Coil 270 290 - -
Gso6g1554 623 Gene3D Ribonuclease Inhibitor 25 188 IPR032675 -
Gso6g1554 623 PANTHER OS05G0588300 PROTEIN 2 622 - -
Gso6g1554 623 SUPERFAMILY Protein kinase-like (PK-like) 353 606 IPR011009 -
Gso6g1554 623 SUPERFAMILY L domain-like 46 229 - -
Gso6g1554 623 PANTHER LRR RECEPTOR-LIKE KINASE 2 622 - -
Gso6g1554 623 Gene3D Ribonuclease Inhibitor 190 230 IPR032675 -
Gso6g1554 623 ProSiteProfiles Protein kinase domain profile. 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1554 623 Gene3D Phosphorylase Kinase; domain 1 338 423 - -
Gso6g1554 623 Pfam Protein kinase domain 355 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1554 623 Gene3D Transferase(Phosphotransferase) domain 1 424 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1554 Gso-Chr6 16006669 16009352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1554 51 604 Receptor kinase-like Gene Family AT1G48480 32.721 6.17e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso6g1554 Pkinase 6.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1554 - - gmx:100787974 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1513 4 44037764 44039698 Gso6g1554 6 16006669 16009352 GST