Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1546 ATGGCAACTCGAAGACTTTCATTGCTCCTCTCTCGCTCTCTATCTTCCACTTCTTTTCAAGCTGCTTCTCTACTTCACTCACTAGGGAGAAACTCTGGCAAGTGGGGAAACTTTAACAGATTCAGCACTGCAGCAGCAGTTGAGGATTTAATCACTCCACAAGTTCCAATAACATACACTAAGCATCTGATAAATGGACAATTTGTGGATGCTGCTTCAGGGAAAACTTTTCCAACATATGACCCACGCACAGGAGAAGTGATTGCTCAAGTTGCTGAAGGTGATGCAGAAGATATCAACCGTGCAGTATCGGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCAAAATTGACTGCTTATGAAAGATGCAAGATAATACTGCGCTTTGCTGATTTGGTTGAGAAACACGGTGATGAACTTGCAGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGTCTGCCACTGCTGAATTACCAACGTTTGTGCGTTTGTTTCGTTACTATGCTGGTTGGGCAGATAAAATCCATGGTCTGACAGTGCCTGCTGATGGAAATTATCATGTGGAGACATTGCATGAACCAATTGGTGTTGCAGGACAAATCATACCTTGGAACTTTCCTCTCCTCATGTTTGCTTGGAAAGTTGGACCAGCTCTTGCATGTGGAAATACTGTCATCCTTAAGACTGCTGAACAAACACCTTTAACAGCTCTCTATGTAGCAAAACTTTTTCATGAGGCTGGTCTTCCACCAGGTGTTTTGAATGTAGTTTCTGGCTATGGTCCAACTGCTGGTGCAGCTCTAGCAAGTCATATGGATGTTGACAAGCTAGCATTCACTGGATCTACCGAGACTGGAAAAGTTGTGCTTGGATTGGCTGCGCAAAGCAATTTGAAGCCTGTGACATTGGAACTTGGAGGGAAATCACCTTTCATAGTGTGTGAGGATGCTGATGTTGACCAGGCTGTAGAACTTGCGCACTTTGCTTTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGGTCTCGTACCTTTGTACATGAGCATATCTATGATGAGTTCTTGGAGAAAGCAAAGGCTCGTGCTTTGAAACGTGTTGTTGGGGATCCCTTCAAAAAGGGTGTCGAACAAGGACCTCAGATTGATGTGGAACAATTCCAGAAGGTCCTTAGGTACATAAAGTCCGGTATTGAAAGCAAGGCCACCCTTGAATGTGGGGGTGACCAAATTGGCTCAAAGGGCTTCTTTGTCCAGCCCACTGTCTTCTCAAATGTTCAGGATGACATGTTGATAGCAAAAGATGAAATATTTGGCCCTGTACAAACCATCTTGAAGTTCAAGGACATCGATGAAGTAATTCGAAGGTCAAACGCAACGCACTATGGTCTAGCTGCAGGAGTTTTCACTAAGAATGTGCACACAGCCAACACTTTGATGCGAGCACTGAGGGTTGGAACAGTATGGATCAATTGCTTTGATGTTTTTGATGCTGCAATTCCCTTTGGAGGGTACAAAATGAGCGGCATAGGCAGGGAGAAGGGTATCTACAGTCTCAACAATTACCTGCAAGTGAAAGCTGTGGTTTCACCAGTGAAGAAACCTGCATGGTTGTGA 1623 0.4467 MATRRLSLLLSRSLSSTSFQAASLLHSLGRNSGKWGNFNRFSTAAAVEDLITPQVPITYTKHLINGQFVDAASGKTFPTYDPRTGEVIAQVAEGDAEDINRAVSAARKAFDEGPWPKLTAYERCKIILRFADLVEKHGDELAALETWNNGKPYEQSATAELPTFVRLFRYYAGWADKIHGLTVPADGNYHVETLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVILKTAEQTPLTALYVAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTETGKVVLGLAAQSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHEHIYDEFLEKAKARALKRVVGDPFKKGVEQGPQIDVEQFQKVLRYIKSGIESKATLECGGDQIGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQTILKFKDIDEVIRRSNATHYGLAAGVFTKNVHTANTLMRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVSPVKKPAWL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1546 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 540 - -
Gso6g1546 540 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Gso6g1546 540 CDD ALDH_F2BC 57 531 - -
Gso6g1546 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 528 IPR016162 GO:0016491
Gso6g1546 540 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 28 540 - -
Gso6g1546 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Gso6g1546 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Gso6g1546 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Gso6g1546 540 Pfam Aldehyde dehydrogenase family 68 530 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1546 Gso-Chr6 15925110 15930670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1546 1 540 Aldehyde Dehydrogenase Gene Family AT3G48000 79.113 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1546 K00128 - gmx:100811501 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1546 6 15925110 15930670 Gso6g1546 6 15925110 15930670 ECH