Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso6g1543 | ATGGAAATTGTGATTTCCTTGATCATACTCTTTATGGGGATAGCAATTTTGATGGTCATCCATGTCTGCGTCGTGGGGAGGGCCTTCACAGGGAATAACAGCAACAACGAAGAAGAATTTACTCATCGCAGCATCAGTGCCATGAAGAGAATGTTTGGCGGCAACAAGGTTGGTAACCTGAAAAACCTTCCTTGCTTTGAGTACGAGGAGAAAGCATGTAAAGAGAAAGGGTGTTGTGGCCTTGTGGATTGTGCTGTTTGCTTGGAGAATTTTAAGATTGGTGATGTGTGCAGGTTGTTACCCAATTGCGGCCACAGCTTCCATGTACAGTGTATAGATTCGTGGATTCTGCAAACACCCGTTTGTCCCATTTGTAGAACATGGGTTCATTCACCAGTTGTGATGAGGGAACAAAGTGCTGTTTCTGAAAATGTAGAAATATCGACTGCATAG | 453 | 0.4371 | MEIVISLIILFMGIAILMVIHVCVVGRAFTGNNSNNEEEFTHRSISAMKRMFGGNKVGNLKNLPCFEYEEKACKEKGCCGLVDCAVCLENFKIGDVCRLLPNCGHSFHVQCIDSWILQTPVCPICRTWVHSPVVMREQSAVSENVEISTA* | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso6g1543 | 150 | ProSiteProfiles | Zinc finger RING-type profile. | 84 | 126 | IPR001841 | - | |
Gso6g1543 | 150 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 1 | 149 | - | - | |
Gso6g1543 | 150 | SUPERFAMILY | RING/U-box | 60 | 132 | - | - | |
Gso6g1543 | 150 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 149 | - | - | |
Gso6g1543 | 150 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 55 | 132 | IPR013083 | - | |
Gso6g1543 | 150 | Pfam | Ring finger domain | 83 | 126 | IPR001841 | - | |
Gso6g1543 | 150 | SMART | ring_2 | 84 | 125 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso6g1543 | Gso-Chr6 | 15896697 | 15897149 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso6g1543 | 40 | 144 | C3H Transcription Factor Family | AT4G28890 | 37.143 | 1.46e-17 | 76.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso6g1543 | - | - | gmx:102662675 | 317.005 |