Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1527 ATGGAAGAAACATTTGTTCCCTTACGTGGGATCAAGAATGATCTCAAAGCAAGAATTCCATGCTACAGACAAGATTGGACCAGTGGATTCCAAGCTGGAATTAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAACACTGATGGAAGTCTCACTGCTGTGCAGACTCTTGCATCAACAGCACTCTGCGGTGTTATTCACTCAATCATTGGAGGACAACCTCTCCTCATACTGGGTGTAGCTGAGCCAACAGTCTTGATGTATACATTCATGTATAACTTTGCTAAGGATCGCAAGGATTTGGGACACAAACTATTCCTACCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTGTTGCTGTTCTTGCTGGCCGTTCTTGGTGCATGTTCCATAATCAATAGATTCACACGCATCGCTGGTGAATTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGTCTTGTGGAAGAGTTTGGTGCACCCAAGAACCAGAGAGAAGGTACCAATCAGGTTGCACTTCAGTCATCTTGGCTGTTTGGTAATGGAATGTTTGCTTTAGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTACAAAGTCGCAAGGCTAGATCCTGGCGTTATGGCTCAGGTTGGCTACGAGGATTTATAGCTGATTACGGAGTCCCACTAATGGTCCTCGTATGGACTGCGGTGTCTTACATACCAGTCAATGAGGTTCCAAAGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCGAATTGGACTGTTGTTAAGGAAATGTTGAATGTGCCCCCCTTATATATTGTTGGAGCATTTATACCAGCAACTATGATTGCAGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGCTGCTCTTAGGATTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCCAATGGTGTAATTCCACAATCTCCAATGCATACGAAGAGCTTGGCTACTCTAAAACATCAGCTTTTACGGAATAAGCTCGTATCTACTGCACGAAAAAGCATGCGGAGAAATGTTAATTTGAGCCAGTTATACCAAAGTATGAAAGAAGCATATGATGAAATACAGACTCCATTGGTTCCCCAAATGCCACTTACCTTGGGGCTGAAAGAACTGAAGGAATCTACTATTGAACTGGCCTCGAGTCAAGGATATCTTGATGCCCCTGTTGATGAGCTTGTCTTTGATGTGAATAAGGATGTTGATGACCTGTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATTGATGGTCGCAGCCTGTGTTGCTGCTATGCCTGTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGCTACTTTGCCTTCATGGCCATTGAAAGCTTGCCAGGAAATCAATTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAGCTGTTGGAGGAATACCATGCCACCTTTGTTGAGACCGTGCCCTTCAAAACAATTGCCATGTTTACTGTGTTCCAGACACTATACCTGCTTCTCTGCTTCGGCATAACCTGGATACCAATTGCCGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTCCCAGTACGGCAATATTTTCTTCCAAAGTTTTTCAAAGGTGCCCATCTTCAAGAGCTGGACGCAGCGGCATATGAGGAAGCACCTGCTATTGCTTTCAACATGTCCTTTGAAGGTCCAAGTAACCAGGCACCAACAGTCAATATCAGCGGTGGGGAAATTCTTGATGAAGTTATTACAAGGAGTCGTGGAGAGTTTCGCCACACTCAAAGCCCCAAAACAACAAGTTCAACTCCAACTTCAATGGGAGATATAAGACCAGCTAATAGCCCTCAATTAACAAGGAGGATTTCTAGCCCTCCAGTAACTGAATTGAGAGGGGAAAGCAGCCTCAGACCAACCAGGAAGGAGATCAAGTTAATGCAAACACCTAGTCCACGGTCACCAGGTCTTGGAAAAGTTACCAAAGATTCACCTTCAACCTAA 2169 0.4403 MEETFVPLRGIKNDLKARIPCYRQDWTSGFQAGIRILAPTTYIFFASAIPVISFGEQLERNTDGSLTAVQTLASTALCGVIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVEEFGAPKNQREGTNQVALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGSGWLRGFIADYGVPLMVLVWTAVSYIPVNEVPKGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQSMKEAYDEIQTPLVPQMPLTLGLKELKESTIELASSQGYLDAPVDELVFDVNKDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTIAMFTVFQTLYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEGPSNQAPTVNISGGEILDEVITRSRGEFRHTQSPKTTSSTPTSMGDIRPANSPQLTRRISSPPVTELRGESSLRPTRKEIKLMQTPSPRSPGLGKVTKDSPST* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1527 722 MobiDBLite consensus disorder prediction 650 686 - -
Gso6g1527 722 MobiDBLite consensus disorder prediction 643 722 - -
Gso6g1527 722 Pfam HCO3- transporter family 8 181 IPR011531 GO:0006820|GO:0016021
Gso6g1527 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Gso6g1527 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Gso6g1527 722 PANTHER BORON TRANSPORTER 2-RELATED 1 707 - -
Gso6g1527 722 PANTHER ANION EXCHANGE PROTEIN 1 707 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gso6g1527 722 Gene3D Helical hairpin bin 17 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1527 Gso-Chr6 15615272 15621193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1527 1 697 Antiporters AT3G62270 75.179 0.0 1057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1527 6 15615272 15621193 Gso6g1527 6 15615272 15621193 ECH
Gso4g1550 4 44845138 44851080 Gso6g1527 6 15615272 15621193 GST
Gso5g0321 5 3349744 3355853 Gso6g1527 6 15615272 15621193 PCT
Gso6g1527 6 15615272 15621193 Gso5g0321 5 3349744 3355853 PCT