Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1525 ATGCAGAGCGCGGCTTTCACTTTCTCTCCCTCTCTCCCTCTCCGCAACCCTTCCCCTAACTCTTGGAGGAGACCCTCTCTTTCTCTCCGTCTCCACGCCAAACACAGCAACAACAACAACAACAGTAACAGCACCGAAGGCGTTAACTCCAATGGCGTCTCTTCCACTTCCTTCACTCGCCGATCTTGGACTCTTCTTCCTTCTTCTTCTTTCAAATTCAGGCCTCTTCCTTCTTCACCTCCTCGCGCCGCCGAAAACGCCGTTCCCGAAAGCGCAGCAGCACCCGTCGAAAACCCGCTCTTCAAAACTCTCGAACTCGGCGCCTTGTTTGGCTTATGGTACCTCTTCAACATCTACTTCAACATCTACAACAAACAGGTGTTGAAGGCGTTTCATTATCCGGTAACTGTGACTGTTGTTCAGTTTGCCGTTGGGACTGTGCTAGTGGCATTTATGTGGGGTTTGAATCTCTATAAGAGGCCGAAACTCAGTGGTGCTATGCTTGGAGCGATTTTGCCGCTGGCTGCAGTGCATACTTTGGGGAACCTTTTCACTAATATGAGTCTTGGGAAGGTGGCCGTGTCTTTCACTCACACTATCAAAGCCATGGAGCCTTTCTTTTCAGTCATCCTTTCTGCCATGTTCCTTGGAGAGTTTCCTACACCGTGGGTGGTTGGTTCCCTTGTGCCTATTGTTGGTGGAGTTGCACTGGCGTCTGTTACCGAGGCCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCATCTAATGTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGGCCATGGTTAAGAAAGAGGATTCTATGGACAACATTACTCTCTTCTCTATAATAACTGTAATGTCCTTCTTCTTGTTAGCACCTGTGGCTATCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACTTGCAATCTGCTGGGGTGAATGTTAGACAACTTTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCGTATCAACAAGTTTCGTATATGATATTGCAAAGGGTATCACCTGTTACCCACTCTGTGGGTAATTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACTCCTGTCTCACCTGTGAATGCTTTTGGGACTGCTATAGCTCTTGCTGGAGTTTTCCTCTATTCAAGGGTGAAGCGTATTAAGGCAAAGCCAAAAACAGCTTAA 1221 0.4709 MQSAAFTFSPSLPLRNPSPNSWRRPSLSLRLHAKHSNNNNNSNSTEGVNSNGVSSTSFTRRSWTLLPSSSFKFRPLPSSPPRAAENAVPESAAAPVENPLFKTLELGALFGLWYLFNIYFNIYNKQVLKAFHYPVTVTVVQFAVGTVLVAFMWGLNLYKRPKLSGAMLGAILPLAAVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEFPTPWVVGSLVPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKAMVKKEDSMDNITLFSIITVMSFFLLAPVAIFMEGVKFTPAYLQSAGVNVRQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALAGVFLYSRVKRIKAKPKTA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1525 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 397 - -
Gso6g1525 406 Pfam Triose-phosphate Transporter family 105 394 IPR004853 -
Gso6g1525 406 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 102 379 - -
Gso6g1525 406 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 404 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gso6g1525 406 MobiDBLite consensus disorder prediction 33 55 - -
Gso6g1525 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 240 - -
Gso6g1525 406 PANTHER SOLUTE CARRIER FAMILY 35 102 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1525 Gso-Chr6 15578068 15583052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1525 1 406 Antiporters AT5G33320 71.531 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1525 K15283 - gmx:100804563 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1525 6 15578068 15583052 Gso6g1525 6 15578068 15583052 ECH
Gso4g1551 4 44909490 44913652 Gso6g1525 6 15578068 15583052 GST
Gso17g0746 17 6882370 6886461 Gso6g1525 6 15578068 15583052 PCT
Gso6g1525 6 15578068 15583052 Gso17g0746 17 6882370 6886461 PCT