Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1487 ATGGCTTTTCTATCATCAGTTCTTAAGCAATTGGCGTATGAACCAAGTTCAACCCATTACCTTACAGCTTTCTTCTGCTTCGTAAGCCTCCTGCTTATGCTTAAGCTAACAAGAAGAAACAAGTCCAATTTTCCTCCATCACCACCAAAGTTACCAATAATTGGCAATCTTCATCAGCTAGGCACACTGCCACACCGCTCCTTCCAAGCACTCTCTCGCAAGTATGGCCCTCTAATGATGCTGCAATTAGGCCAAACTCCAACCCTAGTGGTCTCATCAGCTGACGTGGCCAGAGAAATAATCAAGACGCATGATGTTGTTTTCTCCAACCGACCACAACCTACGGCTGCTAAAATCTTTCTCTATAATTGCAAGGATGTTGGTTTTGCGCCCTACGGCGAAGAGTGGAGACAGACGAAGAAGACATGTGTGGTTGAGCTTCTGAGCCAGAGAAAGGTGCGGTCGTTTCGTTCTATCCGAGAAGAGGTTGTTTCGGAGTTGGTTGAAGCTGTACGTGAAGCATGTGGTGGTAGTGAAAGAGAAAATCGACCATGTGTGAATCTGAGTGAGATGCTGATTGCAGCTTCCAACAACATTGTTTCAAGATGTGTAATTGGACGGAAGTGTGATGCTACAGTGGGTGATAGCGTGAATTGCAGCTTTGGAGAACTGGGAAGAAAGATTATGAGACTATTCTCGGCTTTCTGCGTCGGTGATTTCTTCCCTTCGTTGGGTTGGGTTGACTATCTGACTGGCCTTATTCCGGAAATGAAGGCCACGTTTCTTGCAGTTGATGCTTTCCTTGACGAGGTAATTGCAGAACGCGAGAGCAGTAACAGGAAGAATGATCACTCTTTCATGGGAATTCTCCTTCAACTTCAAGAGTGTGGGAGGCTTGACTTTCAGCTCAGCCGAGATAACCTCAAAGCAATCCTAATGGACATGATAATAGGTGGGAGCGACACCACTTCAACAACTCTAGAATGGGCTTTTGCAGAGCTCCTTAGGAAGCCAAATACTATGAAGAAAGCTCAAGAAGAGATAAGAAGAGTGGTGGGAATCAATTCTAGAGTAGTATTAGATGAAAATTGTGTGAATCAAATGAACTACTTGAAATGTGTAGTCAAAGAAACTTTGAGATTACATTCACCTGTTCCTCTTTTGGTTGCTCGAGAGACATCATCAAGTGTAAAACTAAGAGGGTACGATATTCCCGCCAAAACAATGGTATTTATCAATGCATGGGCAATCCAGAGGGATCCTGAATTATGGGATGATCCTGAAGAATTTATTCCTGAAAGATTTGAAACTAGCCAAATTGATCTTAATGGACAAGATTTTCAATTAATTCCATTTGGTAGTGGGAGAAGGGGATGTCCTGCTATGTCATTTGGGCTTGCTTCAACTGAGTATGTTCTTGCTAATCTTTTGTATTGGTTCAATTGGAATATGTCCGAGTCTGGTATGTTGATGCACAACATTGACATGAATGAGACCAATGGACTCACTGTCTCCAAAAAAATACCACTTCATCTTGAACCAGAACCACATATACCCTGA 1560 0.4295 MAFLSSVLKQLAYEPSSTHYLTAFFCFVSLLLMLKLTRRNKSNFPPSPPKLPIIGNLHQLGTLPHRSFQALSRKYGPLMMLQLGQTPTLVVSSADVAREIIKTHDVVFSNRPQPTAAKIFLYNCKDVGFAPYGEEWRQTKKTCVVELLSQRKVRSFRSIREEVVSELVEAVREACGGSERENRPCVNLSEMLIAASNNIVSRCVIGRKCDATVGDSVNCSFGELGRKIMRLFSAFCVGDFFPSLGWVDYLTGLIPEMKATFLAVDAFLDEVIAERESSNRKNDHSFMGILLQLQECGRLDFQLSRDNLKAILMDMIIGGSDTTSTTLEWAFAELLRKPNTMKKAQEEIRRVVGINSRVVLDENCVNQMNYLKCVVKETLRLHSPVPLLVARETSSSVKLRGYDIPAKTMVFINAWAIQRDPELWDDPEEFIPERFETSQIDLNGQDFQLIPFGSGRRGCPAMSFGLASTEYVLANLLYWFNWNMSESGMLMHNIDMNETNGLTVSKKIPLHLEPEPHIP* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1487 519 Pfam Cytochrome P450 45 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 Gene3D Cytochrome P450 30 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PANTHER CYTOCHROME P450 71B11-RELATED 14 516 - -
Gso6g1487 519 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1487 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Gso6g1487 519 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 14 516 - -
Gso6g1487 519 SUPERFAMILY Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1487 Gso-Chr6 14970180 14972833 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1487 35 511 Cytochrome P450 AT3G48310 42.887 7.15e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1487 K20617 - gmx:100792382 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1487 6 14970180 14972833 Gso6g1487 6 14970180 14972833 ECH
Gso5g0358 5 3759138 3761523 Gso6g1487 6 14970180 14972833 PCT
Gso17g1056 17 9999496 10004161 Gso6g1487 6 14970180 14972833 PCT