Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1486 ATGGCTCTACTATCATCAGTCCTAAAGCAATTGCCGCATGAGCTAAGTTCAACCCATTACCTAACAGTTTTCTTCTGCATCTTCCTTATACTTCTTCAGCTAATAAGAAGAAACAAATACAATCTGCCACCATCCCCACCAAAGATACCCATAATCGGCAATCTTCACCAGCTAGGCACACTGCCACACCGCTCCTTTCATGCACTCTCACACAAATATGGCCCTCTCATGATGTTGCAATTGGGTCAAATTCCAACCCTAGTGGTCTCATCAGCTGACGTGGCCAGAGAAATAATCAAAACGCATGATGTTGTTTTCTCCAACCGCCGACAACCTACAGCTGCTAAAATCTTTGGTTATGGATGCAAGGATGTGGCTTTCGTGTACTACGGCGAAGAGTGGAGACAAAAGATAAAGACATGTAAGGTTGAGCTTATGAGTCTGAAGAAGGTGCGGTTGTTTCATTCCATTAGACAAGAAGTTGTTACAGAGTTGGTTGAAGCTATAGGTGAAGCGTGTGGTAGTGAAAGACCATGTGTGAATCTGACTGAGATGCTGATGGCAGCATCGAACGACATTGTGTCTAGATGTGTTCTTGGACGGAAGTGTGATGATGCATGTGGTGGTAGTGGCAGTAGCAGCTTTGCAGCGTTGGGAAGAAAGATTATGAGACTATTATCGGCTTTCAGCGTGGGTGATTTCTTCCCTTCGTTGGGTTGGGTTGACTATCTGACTGGCTTAATTCCAGAGATGAAAACCACGTTTCTCGCAGTAGATGCTTTCCTTGATGAGGTAATTGCAGAACACGAGAGCAGTAACAAGAAGAATGATGACTTCTTGGGGATACTTCTTCAACTTCAAGAATGTGGGAGGCTTGACTTTCAGCTCGACCGAGATAACCTCAAAGCAATCCTAGTGGACATGATAATAGGTGGGAGTGACACTACTTCAACAACTCTAGAATGGACTTTTGCGGAGTTCCTTAGAAATCCAAATACCATGAAGAAAGCTCAAGAAGAGGTAAGAAGAGTGGTGGGAATCAATTCCAAAGCAGTACTGGATGAAAATTGTGTGAATCAAATGAACTACTTGAAATGTGTAGTCAAAGAAACTTTGAGATTACATCCACCCCTTCCTCTTTTGATTGCTCGAGAGACATCATCAAGTGTAAAACTAAGAGGGTACGATATTCCCGCAAAAACAATGGTATTTATCAATGCATGGGCGATCCAGAGGGATCCTGAATTATGGGATGATCCTGAAGAATTTATTCCCGAAAGATTTGAAACTAGCCAAGTTGATCTTAATGGACAAGATTTTCAATTAATTCCGTTCGGTATTGGGAGAAGGGGATGCCCTGCAATGTCATTTGGACTTGCTTCAACTGAGTATGTTCTTGCTAATCTTTTGTATTGGTTCAATTGGAATATGTCCGAGTCTGGACGTATATTGATGCACAACATTGACATGAGTGAGACAAATGGACTCACTGTCAGTAAGAAAGTACCACTTCATCTTGAACCAGAACCATATAAAACATGA 1542 0.4228 MALLSSVLKQLPHELSSTHYLTVFFCIFLILLQLIRRNKYNLPPSPPKIPIIGNLHQLGTLPHRSFHALSHKYGPLMMLQLGQIPTLVVSSADVAREIIKTHDVVFSNRRQPTAAKIFGYGCKDVAFVYYGEEWRQKIKTCKVELMSLKKVRLFHSIRQEVVTELVEAIGEACGSERPCVNLTEMLMAASNDIVSRCVLGRKCDDACGGSGSSSFAALGRKIMRLLSAFSVGDFFPSLGWVDYLTGLIPEMKTTFLAVDAFLDEVIAEHESSNKKNDDFLGILLQLQECGRLDFQLDRDNLKAILVDMIIGGSDTTSTTLEWTFAEFLRNPNTMKKAQEEVRRVVGINSKAVLDENCVNQMNYLKCVVKETLRLHPPLPLLIARETSSSVKLRGYDIPAKTMVFINAWAIQRDPELWDDPEEFIPERFETSQVDLNGQDFQLIPFGIGRRGCPAMSFGLASTEYVLANLLYWFNWNMSESGRILMHNIDMSETNGLTVSKKVPLHLEPEPYKT* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1486 513 PANTHER CYTOCHROME P450 71B11-RELATED 15 510 - -
Gso6g1486 513 Gene3D Cytochrome P450 31 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Gso6g1486 513 SUPERFAMILY Cytochrome P450 43 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso6g1486 513 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 510 - -
Gso6g1486 513 Pfam Cytochrome P450 43 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1486 Gso-Chr6 14960120 14963191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1486 38 505 Cytochrome P450 AT3G48310 43.404 2.32e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1486 K20617 - gmx:606503 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1486 6 14960120 14963191 Gso5g0360 5 3785058 3788934 PCT