Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1450 ATGTGGTCTCAGGTTGGACCAAAAGAAGAGACAACTGTGGTTGAGAAAACTGGGAAGAGTGAAGACAAAGTGAAGAAGATCATCACTATTATCATTTCAATGGCTACCCAAACCCAAACACAGTCACATCCAAACACCACCACTATCGACCCAAACAGCGGCTTCTGTTCTCATTCCAGAACCTTCCATTCCCTCCGTCCAAACGTTCCTCTCCCTCCGCCCTCCCACCCCCTCTCCCTCACCGACTACGTCTTCTCCCTCCTACCCTCCGCCGCCACAGCCACCGCCTCCTCATCCATCACCTCCGCCATCATCGACGCCGCCACCGACCGCCACCTGTCCTACTCCCTCCTCCTCCGCCAAGTCAAATCCCTTACCTCCTCCCTTCAATCCCTCACACCTCTCTCCAAAGGCCACGTGGCACTCATCCTCACCCCTTCCTCCCTTCACGTCCCCGTACTCTATTTTTCCCTCCTCTCCCTCGGCGTCACCATCGCCCCCGCGAATCCACTCAGTTCCCAATCCGAGTTGACTCACCTGGTCAAACTCGCGAAACCTGTCATCGCGTTTTCCACCTCGAACGCCGCGAAAAACATTCCCTCCTCCCTCAAATTCGGCACAATCCTCCTCGATTCCCCTCTCTTCCTTTCCATGCTCAACAACAACGAATACGTCAACGCCGATTCACGAACTCGCCGAGTCGAAGTGAGTCAGTCTGACTCGGCGGCGATTCTGTTCTCCTCGGGAACCACGGGGCGCGTGAAGGGCGTGCTCCTTACGCACCGCAACTTCATCGCGCTGATTGGAGGGTTCTATCACCTTAGAATGGTGGTGGATGATGATCCGCACCCGGTGTCGTTGTTCACGCTCCCGCTGTTCCACGTGTTCGGGTTCTTTATGCTGGTTAGGGCCATCGCCGTCGGAGAGACGCTTGTGTTCATGCATAGGTTTGATTTCGAAGGGATGCTGAAAGCTGTGGAGAGGTATAGAATCACCTACATGCCGGTGTCGCCGCCGCTCGTGGTGGCGCTGGCGAAGTCGGAACTCGTGAAGAAGTATGATATGAGTTCGCTACGGTATTTGGGCAGCGGCGGCGCGCCGCTCGGGAAGGAGGTCGCCGAGGACTTTAGAGCCCAATTCCCCAACGTGGAAATTGGGCAGGGCTATGGTTTGACTGAAAGTGGAGGAGGGGCAGCTAGAGTGTTGGGGCCTGATGAGTCTAAGCGCCATGGTTCTGTGGGTCGACTATCAGAAAATATGGAGGCCAAGATAGTGGACCCTGTTACTGGAGAAGCATTATCTCCTGGCCAAAAAGGGGAGCTCTGGTTGCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAGAAGGCCACAGCTGAAACATTGGATTCAGAAGGATGGCTGAAGACTGGTGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATATACTTCACACCAATCCTGAAATTGCTGATGCTGCAGTAGTTCCGTATCCTGATGAAGAGGCAGGACAGATTCCAATTGCCTTTGTAGTAAGAAAGTCTGGAAGCAACATCACTGCAGATCAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCACCATACAAGAAGATACGGCGAGTTTCTTTCATCAAATCTATCCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTATCCTGTGGTTCATCCAAATTGTGA 1794 0.519 MWSQVGPKEETTVVEKTGKSEDKVKKIITIIISMATQTQTQSHPNTTTIDPNSGFCSHSRTFHSLRPNVPLPPPSHPLSLTDYVFSLLPSAATATASSSITSAIIDAATDRHLSYSLLLRQVKSLTSSLQSLTPLSKGHVALILTPSSLHVPVLYFSLLSLGVTIAPANPLSSQSELTHLVKLAKPVIAFSTSNAAKNIPSSLKFGTILLDSPLFLSMLNNNEYVNADSRTRRVEVSQSDSAAILFSSGTTGRVKGVLLTHRNFIALIGGFYHLRMVVDDDPHPVSLFTLPLFHVFGFFMLVRAIAVGETLVFMHRFDFEGMLKAVERYRITYMPVSPPLVVALAKSELVKKYDMSSLRYLGSGGAPLGKEVAEDFRAQFPNVEIGQGYGLTESGGGAARVLGPDESKRHGSVGRLSENMEAKIVDPVTGEALSPGQKGELWLRGPTIMKGYVGDEKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEEAGQIPIAFVVRKSGSNITADQVMEFVAKQVSPYKKIRRVSFIKSIPKSPAGKILRRELVDYALSCGSSKL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1450 597 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 62 586 - -
Gso6g1450 597 CDD 4CL 106 585 - -
Gso6g1450 597 ProSitePatterns Putative AMP-binding domain signature. 244 255 IPR020845 -
Gso6g1450 597 Pfam AMP-binding enzyme 103 495 IPR000873 -
Gso6g1450 597 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 62 586 - -
Gso6g1450 597 Gene3D - 72 490 IPR042099 -
Gso6g1450 597 SUPERFAMILY Acetyl-CoA synthetase-like 94 589 - -
Gso6g1450 597 Pfam AMP-binding enzyme C-terminal domain 504 579 IPR025110 -
Gso6g1450 597 Gene3D - 491 591 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1450 Gso-Chr6 14458239 14462858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1450 45 597 Monolignol Biosynthesis Gene Families AT5G63380 60.286 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1450 K01904 - gmx:100804044 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1450 6 14458239 14462858 Gso6g1450 6 14458239 14462858 ECH