Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1428 ATGGAATGTAATAAAGCTGGTGCCTTAAGGGCTAAAGAACTTGCAGAGAAGATGCTTTTACAGAGGAACTTTGGTGGGGCAAGAATGCTCGCAATGAAGGCTCTAGAATTATATCCCAATCTTGATGGTCTTCCTCAATTTCTAGCAACTATTGAGGTGTATATCTCTTCCGAAGCTAGAGTTAATGGAGAACTTGATTGGTACAGTATCCTTGGTGTGCAACCGTTGGCTGATGAAGAAACAATTCGAAGACGATATAGGAAACTGGCTCTTACTCTGCACCCTGATAAAAATAGATCCGTAGGTGCAGATGGGGCATTTAACCTTGTCTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATCACCTATGACCAAAAGAGCAGTTTATGGGGTAATGGAAATCCTGGTGGGAAACCTTCTATGCCAGCTAGTCAGAATGGTTTACATACTAACGTCTTCAATCCTGTGTTGTTGAAACCCACATTTTGGACCTTTTGCAGTTTCTGCAAGACAAAGTTTGAGTACCATAATGCTTATATTAACAGCAATCTTGTATGTACCTGCTGTCATAAGCCATTTTTGGCTTTCGAGACATTGCCTCCACCTGGATACAGAAATGTTTCATCCACCCAGATGAAGCAGCATAACTTCAACTCAACGAGAATGGAAAGAAGTTATCATTTTTCAGGACGGACACCTATGTCTACTGTCAATTCATCACTTGGGTCAGGCCCTTTCTCTATGCCTGGCAGTATTTCCCATGTTCCGACATCAGCTTCTAGTGCTGCAGAAGCTCCTGGTGCTTTTAGGATGCCATCTGAGAATTTGAAGACAAGGCATGAAGATTCGGCAACTGTCTTGAGGGAAGATGCCCATTTTGGGAAAGCTCATGCTGTTGAGAGAACTGGTGCTGGTTCAGCTTTTCAGTCCTCTCGTTTTGGTTCAACTTCTATTATGAAAGGAGACAGGCCAAGGAAAAAAAGGCCCACTGATGAACATAAAGTTTGTAGTGATAGAAGGGATATGGAAAATAAAACAGCATCTCAAAATGAAGGAATAAACTTGGCAAATGGATTTGGGTCAGGAAGGGTTAATGCTGCTGGAAATCACAAACGCAATGGTGTTAGGGACAGATCACAGCAGCAAATAAAGAACATATTGGTGGAAAAGGCTCGGAAGGAGATTCTTATAAAGCTTGATGAATGGAAAGCTTCTTCTGCATTAAAGAATTTCGACAAGTCAAAGAATACAGACACAGAAATCGGAGAGAAGGGCAAAGAAAGGGAAGTAAATGGTGTAAAACCTGGTGCACAAGTTGGTGATTCTGAGACCGTGGACAAGAAGTGTTTCTCTGCTGATCCAGAGCCAGAGCTGCCTGTTTCTCTCTCAATGAATGTTCCTGATCCAGATTTCCATGATTTTGATGGAGACCGAATTGAAAATGCTTTTGGTGAGAACCAGGTATGGGCTGCATATGATAATGATGATGGCATGCCGCGCTACTTTTGCTTAATCCATGATGTTATCTCGAAAAAACCTTTGAATATGAGGATTAGCTGGTTGAATGCCAAAAGCAATGATGAATTGGCCCCAATAAAGTGGGTCAGTTCTGGCTTTCCTAAGACCAGCGGAGATTTCAGAATAGGAAAGCGTGTATCCTATAGCACTCTTAATTCCTTCTCCCACAGGGTTAAATGGACAAAAGGTTCAAGAGGGATTGTTCATATATATCCGAAGAAAGGTGACGTATGGGCTTTGTATCGGAACTGGTCCCTTGACTGGAATGAATTTACCGATGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGACTACAGTGAAGAGAAAGGTGTGAATATTGCCCCACTTGTCAAGGTTGCAGGTTTCAAGACAGTATTCCGACAGAACGCTGATCCAAGAAAAGTCAGGAATATTTCAAAGGCGGAGATGTTTCGTTTCTCACACCAGGTACCTTCATACCTGCTTACTGGTGAAGAGGGTCAGAATGCTCCAAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACACCGATGGAACTTTTTCAGGTGTTAGCCGAAGATCTGGAGCAAGAAATTGTAATGACAACTGAAAAATCTGTGGAAGATGAATTGAAGCACAAAGAGAATTCCGGGGAGGAGGGTTTGATCAAGAAGTGCCAGACAACTAAGGAAGAAGGTTCTGATGAAGAAGGATTGGTGGGAGAGAAGAAAAGGAAGCCTGAGAGTTGCCAGACAACTAAGGAAGAACGTTCCAATGAAGAACTGGGAGAGAAGAAAAGGAAGCCTGAGATCTTGTTTGTATATAAGCGGAGACGTCTAGGTGAAAAGAGAGCTGTGAAGTGTTAA 2382 0.4244 MECNKAGALRAKELAEKMLLQRNFGGARMLAMKALELYPNLDGLPQFLATIEVYISSEARVNGELDWYSILGVQPLADEETIRRRYRKLALTLHPDKNRSVGADGAFNLVSQAWSLLSDKAKRITYDQKSSLWGNGNPGGKPSMPASQNGLHTNVFNPVLLKPTFWTFCSFCKTKFEYHNAYINSNLVCTCCHKPFLAFETLPPPGYRNVSSTQMKQHNFNSTRMERSYHFSGRTPMSTVNSSLGSGPFSMPGSISHVPTSASSAAEAPGAFRMPSENLKTRHEDSATVLREDAHFGKAHAVERTGAGSAFQSSRFGSTSIMKGDRPRKKRPTDEHKVCSDRRDMENKTASQNEGINLANGFGSGRVNAAGNHKRNGVRDRSQQQIKNILVEKARKEILIKLDEWKASSALKNFDKSKNTDTEIGEKGKEREVNGVKPGAQVGDSETVDKKCFSADPEPELPVSLSMNVPDPDFHDFDGDRIENAFGENQVWAAYDNDDGMPRYFCLIHDVISKKPLNMRISWLNAKSNDELAPIKWVSSGFPKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGIVHIYPKKGDVWALYRNWSLDWNEFTDDEIIQKYDMVEVLEDYSEEKGVNIAPLVKVAGFKTVFRQNADPRKVRNISKAEMFRFSHQVPSYLLTGEEGQNAPKGCLELDPAATPMELFQVLAEDLEQEIVMTTEKSVEDELKHKENSGEEGLIKKCQTTKEEGSDEEGLVGEKKRKPESCQTTKEERSNEELGEKKRKPEILFVYKRRRLGEKRAVKC* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1428 793 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gso6g1428 793 Gene3D DnaJ domain 64 168 IPR036869 -
Gso6g1428 793 MobiDBLite consensus disorder prediction 256 281 - -
Gso6g1428 793 Pfam Domain of unknown function (DUF3444) 466 672 IPR024593 -
Gso6g1428 793 MobiDBLite consensus disorder prediction 311 382 - -
Gso6g1428 793 SUPERFAMILY Chaperone J-domain 63 152 IPR036869 -
Gso6g1428 793 CDD DnaJ 66 119 IPR001623 -
Gso6g1428 793 MobiDBLite consensus disorder prediction 714 770 - -
Gso6g1428 793 Pfam DnaJ domain 66 127 IPR001623 -
Gso6g1428 793 SMART dnaj_3 65 122 IPR001623 -
Gso6g1428 793 MobiDBLite consensus disorder prediction 322 349 - -
Gso6g1428 793 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gso6g1428 793 PANTHER HEAT SHOCK PROTEIN-LIKE 1 718 - -
Gso6g1428 793 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gso6g1428 793 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gso6g1428 793 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gso6g1428 793 PRINTS DnaJ domain signature 122 141 IPR001623 -
Gso6g1428 793 PANTHER BNAC03G44070D PROTEIN 1 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1428 Gso-Chr6 14227533 14231882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1428 4 204 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.735 1.01e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1428 - - gmx:100797672 1612.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1657 4 46411770 46416182 Gso6g1428 6 14227533 14231882 GST