Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1421 ATGGAGAAACACCAAGTGATGCTCCCTACTTCATCTACATCATCAACTCCCTTTTCATCTGATTTTAAAGTTGATTATATTAATTCTACTGTTCATGTTGAGAATGAGGCTATAAGAACTCAAAGGAAGGCCATATCAGCGCAGAACAAAAGAGACAAAGAGTTTATAATTAAGCAGCACAGATATGTATTTCAAACAAAGAGTCCGGTTGATGTTCTGGACGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTGAAAAACAATAAGTTTCCAAGAAGTTACTACAGGTGCTCTCATCAAGATTGCAATGTCAAGAAACAAATCCAACGCCATTCCCGAGATGAACAGATTGTGGTAACAACCTACGAAGGGACACATACACACCCAGTCGACAAGTCAGCGGAAAGCTTCGACCAAATCTTGGGAAACCTACTCATAGGCAACCTAGTATGTAATGTGCCTCCCACATTGGAATAG 483 0.3996 MEKHQVMLPTSSTSSTPFSSDFKVDYINSTVHVENEAIRTQRKAISAQNKRDKEFIIKQHRYVFQTKSPVDVLDDGYQWRKYGKKIVKNNKFPRSYYRCSHQDCNVKKQIQRHSRDEQIVVTTYEGTHTHPVDKSAESFDQILGNLLIGNLVCNVPPTLE* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1421 160 Gene3D WRKY domain 58 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1421 160 Pfam WRKY DNA -binding domain 74 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1421 160 ProSiteProfiles WRKY domain profile. 68 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1421 160 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 149 - -
Gso6g1421 160 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 149 IPR044810 GO:0003700
Gso6g1421 160 SUPERFAMILY WRKY DNA-binding domain 66 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1421 160 SMART WRKY_cls 73 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1421 Gso-Chr6 14152541 14153913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1421 61 148 WRKY Transcription Factor Family AT5G13080 65.909 8.86e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso6g1421 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1421 - - gmx:100796070 328.176