Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1415 ATGGCAATTGCAGGCATGTCTAGCATTGAACTTAACGTAAAGCAGCAAGGAGAACCAACCCGGGTTCAGCCTGCACAGGAAACAGAAAAGGGACTCTACTTCCTTTCAAACCTAGACCAGAACATTGCTGTTCCAGTGCGCACGGTTTATTGCTTCAAATCCGGTTCTAGAGGAAACGAGGATGCTGCACAAGTTATCAAGGAAGCTTTGTCGAAAATTCTTGTCCCTTATTACCCCATGGCTGGCACCTTGATGATAAGCTTGGAAGGGAAGTTAATAGTGGATAACCCTGGGGAGGGTGCGGTGTTCGTTGAGGCTGAAGCAGATTGTGACATTGAAGAGATTGGGGACTTGACAAAGCCTGACCCTGATGCTCTTGGGAAACTGGTGTACAATGTTCCTGGTGCTCGAAGCATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTTACATTGGGGCTATGCATGATCCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGCGAGACAGCCCGAGGTTTGGACTTGAAGACCCCACCATTTCTCGATCGAACCATAATCAAAGCACGCGACCCTCCCAAGATAGAGTTCCAACACAACGAATTCGCCCAAATAGAAGACATATCAAACACTAAAAAACTCTACGAGGAAGAAAACATGCTCTACAGATCCTTCTGCTTCGATTCTGAGAAGCTCGACATGCTCAAGAAAAAGGCCACGGAAGATGGGGTTCTGGAAAAGTGCTCCACTTTTGAAGCACTCTCAGGTTTTGTATGGAGAGCTCGAACTGCAGCATTAAGAATGCAACCTGATCAACAAACAAAGCTTTTGTTCGCGGTAGATGGAAGGTCAAGATTTGTGCCACCAATACCAAAAGGGTACTTTGGGAATGCTATTGTGCTGACAAATTCGTTGTGTAATGCTGGGGAGTTATTGAAGAACCCTTTATCATTTTCTGTGGGATTGATTCGTGAGGCTATTGAGATGGTCACGGATAGTTACATGAGATCTGCCATTGACTATTTTGAAGTCACAAGAGCTAGGCCTTCTTTAGCAGCTACCCTTTTGATCACAACTTGGACTAAGTTGTCTTTTCACACTACAGATTTTGGCTGGGGAGAACCTCTTTGTTCTGGCCCTGTGACCCTGCCAGAGAAAGAAGTTATCTTGTTCTTGTCACATGGTCAAGAAAGGAAAAGTGTAAATGTTCTTCTGGGTTTGCCAAGTTCTGCTATGGAAATTTTTGAAGCATTGGTGATGATGCAGGTGTGA 1311 0.4493 MAIAGMSSIELNVKQQGEPTRVQPAQETEKGLYFLSNLDQNIAVPVRTVYCFKSGSRGNEDAAQVIKEALSKILVPYYPMAGTLMISLEGKLIVDNPGEGAVFVEAEADCDIEEIGDLTKPDPDALGKLVYNVPGARSILEMPLMTVQVTKFKCGGFTLGLCMIHCMKDGLCAMEFVNAWSETARGLDLKTPPFLDRTIIKARDPPKIEFQHNEFAQIEDISNTKKLYEEENMLYRSFCFDSEKLDMLKKKATEDGVLEKCSTFEALSGFVWRARTAALRMQPDQQTKLLFAVDGRSRFVPPIPKGYFGNAIVLTNSLCNAGELLKNPLSFSVGLIREAIEMVTDSYMRSAIDYFEVTRARPSLAATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGQERKSVNVLLGLPSSAMEIFEALVMMQV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1415 436 Gene3D - 216 433 IPR023213 -
Gso6g1415 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 432 - -
Gso6g1415 436 Pfam Transferase family 20 429 - -
Gso6g1415 436 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 13 432 - -
Gso6g1415 436 Gene3D - 15 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1415 Gso-Chr6 14061486 14065208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1415 9 433 Monolignol Biosynthesis Gene Families AT5G48930 37.415 3.23e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1415 K15400 - gmx:100794490 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1415 6 14061486 14065208 Gso6g1415 6 14061486 14065208 ECH