Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1414 ATGGCATGCATATCTAATTCCATACCTTCTATATTTCTTGTATATATATTTTCTTTTCTTAGGAATCAAACAGGGTTATTGCAGGATTTGTCAAGAATACTAATGGACCTTGCAAAGGGAAAGTGGAAGCAAAACATGATTTTCAAGGCGTGGGAGCGTTGCCGATTAACTTCAAGGCCACACTTGAAACTAAAATCACTGTCAGAGAATGATGATCATCATCATCATGAGAAGAAGAAGAAAAAGAATAGTCAAATAGCCCCTCATGGTTGTTTTTCAGTGCATGTTGGACCAGAGAGAAAAAGGTTCGTTGTGAAGACCAAATACGTTAACCACCCACTCTTTCAGATGCTGCTAGAAGAAGCAGAACATGAATATGGGTTCGAGAGTGATGGCCCCATTTGGCTTCCTTGCAACGTTGATTTGTTCTACAAAGTGTTGGCTGAGATGGATGGAGAAGAGAATCATAATAATAATAATAACATCATTTTCCATGGTTCTCGAAGAAGCTTCACTACCATGGCTAAGGTTTTTCCTTTTTTCGTTCTTCGCAGCCCTTCACGTCTTCTTTGTCACATGAACAAGGGTCATGGGTCATGCAGCGTTATGGATTCGGAATTGCTCAGAATAAACCGATTCCATTAG 645 0.3969 MACISNSIPSIFLVYIFSFLRNQTGLLQDLSRILMDLAKGKWKQNMIFKAWERCRLTSRPHLKLKSLSENDDHHHHEKKKKKNSQIAPHGCFSVHVGPERKRFVVKTKYVNHPLFQMLLEEAEHEYGFESDGPIWLPCNVDLFYKVLAEMDGEENHNNNNNIIFHGSRRSFTTMAKVFPFFVLRSPSRLLCHMNKGHGSCSVMDSELLRINRFH* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1414 214 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 170 IPR003676 GO:0009733
Gso6g1414 214 Pfam Auxin responsive protein 65 148 IPR003676 GO:0009733
Gso6g1414 214 MobiDBLite consensus disorder prediction 66 86 - -
Gso6g1414 214 PANTHER SMALL AUXIN-UP RNA-RELATED 43 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1414 Gso-Chr6 14056426 14057554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1414 88 148 Calmodulin-binding Proteins AT4G34750 49.180 1.15e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1414 K14488 - gmx:100793967 420.239