Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1412 ATGGCCGAAATTTATGTCTCCAATATTTCTGCATCACTGTTAGGGAAGCTTGCTTCTCACGTTTATGAAGAAGCTTCTCGGGCCTATGTTGTGTATGAGGATCTGCAAGGGATCAAAGACCCTTTGTCAATTGTCAATGGTGTACTATTGGGTGCTGAGGAGAAGAAGGAGCAAAGGCAAGGGCTTCGCGAATGGCTGAGGCAGATTCAAAACGTCTGCTACGATGCTGAAGATGTGTTGGATGAATTTGAGTGCCTAAAATTGCGAAAGCAAGTTGTCAAAGCTTCAGGCAGCACCAGCATGAAGGTAGGACACTTCTTTTCTTCGTTAAATCCTCTTGTTTTCCGTCTTAGGGTGACTCGTCGAATCAAAGATGTTAGGGAGAGATTGGATAAGATAGCAGCTGATGGAAACAAGTTTGGTCTTGAGAGGATTGGTGGTGATCATAGACTTGTGCCTAGGAGAGAAATGACTCATTCCCATGTTGATGCTTCAGGGGTGATAGGAAGGGGAAATGATAGGGAAGAAATTATCAAGCTTTTGATGCAATCTCACCCTCATGGTGATGGTGATGGAGATAAAAGTCTTTGTGTTATTCCCATAGTGGGCATTGGAGGCTTGGGGAAGACCACACTTGCAAAGTTGGTCTTCAATGATAAGAGGATGGATGAACTTTTCCAATTGAAGATGTGGGTGTGTGTTTCTGATGATTTTGACATTAGGCAGATGATTATTAAAATCATCAATTCTGCTGCTTATGCTTCAGCTCCAGCTATTGCTACCCAAGAAAACATTAGCAGCTTAGATATTGAGCAGCTACAAAGTCGTCTAAGATATAAGCTTTCGGGTCAGAAATTTTTACTAGTCTTAGATGATACGTGGAATGATGATCGGGCAAAATGGACAGAGTTGAAAGATTTAATAAAAGTTGGTGCCGCGGGAAGCAAAATCATAGTCACAACGCGAAGTAACTCAATTGCTTCAATGATTGGCACTGTTCCCTCATACATTTTAGAAGGTCTTTCCATTGAGAATTGTTTATCTCTGTTTGTCAAATGGGCATTTAAGGAAGGTGAAGAAAAAAAATATCCAAATCTAGTGGAGATCGGAAAAGAAATTGTGAAAAAATGCCAAGGGGTTCCATTAGCCGTTAGAACTCTAGGAAGTTCCTTGTTCTTAAATTTTGATTTAGAAAGGTGGGAATTTGTAAGAGACAATGAGATATGGAACTTACAACAAAAGAAGAATGATATTTCACCTGCCCTTAAGTTGAGCTATGATCAAATGCCGTCCTATTTGAGGCACTGTTTTGCGTTCTTTTCTCTTTATCCTAAAGATTTTGGCTTTACCGGTGCTCTTATTGCTAATCTTTGGGCAGCACTTGGATTGCTTCGATCTCCAGTTGGAAGTCAGAAGATGGAGAACATTGCAAGACAGTATGTAGATGAGTTACACTCAAGATCATTTCTTGAGGATTTTGTGGATTTAGGTCACTTTTACTATTTCAAAGTACATGATTTGGTACATGATCTTGCCCTGTATGTTTCAAAAGGAGAGCTTCTAGTGGTAAACTACCGGACACGAAACATACCTGAGCAAGTAAGGCATCTATCAGTTGTTGAAAATGATCCACTTAGCCATGTTGTGTTTCCCAAGTCCAGAAGGATGAGAACTATATTATTTCCCATCTATGGAATGGGTGCTGAGAGTAAAAATCTTTTGGACACATGGATAAAGAGATACAAATACTTACGGGTTTTAGATTTAAGTGATTCCTCTGTTGAGACTCTACCTAATTCAATTGCTAAATTGCAGCATCTGCGAGCTCTTCATCTTACAAATAACTGCAAAATAAAAAGACTTCCTCATTCTATATGCAAACTCCAGAATTTGCAGTACTTGTCACTCAGAGGATGCATTGAACTTGAAACATTGCCTAAAGGATTAGGGATGTTAATCAGCCTTCGAAAATTGTATATAACCACGAAACAATCTATTCTCTCAGAGGATGATTTTGCAAGTTTGAGCAATCTTCAAACCTTGAGTTTTGAATATTGTGACAATTTGAAGTTTTTGTTCAGAGGGGCACAACTCCCTTACCTTGAAGTTTTGCTCATTCAATCATGTGGGAGCCTAGAGTCCTTACCTCTTCATATTCTCCCTAAACTAGAGGTTCTGTTTGTAATACGGTGTGAGATGCTAAATCTGTCGTTTAACTATGAAAGCCCAATGCCAAGATTCAGGATGAAGTTTCTGCATCTTGAGCATTGTTCAAGGCAACAGACATTGCCTCAATGGATTCAAGGAGCCGCTGACACTTTGCAGACATTGTTAATTTTACACTTTCCCAGTCTAGAGTTTCTTCCTGAGTGGCTGGCAACAATGACTCGTCTTAAGATACTCCATATTTTTAACTGTCCTCAACTGTTGTATCTTCCAAGTGACATGCTTGGCCTCACTGCCCTTGAAAGATTGATCATAGATGCTTGTCCTGAATTGTGTCGAAAATGTCACCCCCAATTTGGTGAGTACTGGTCCTTAATAGCTCACATCAAACACATTTCCATTGGAGAAACAAAAGCAAGGCAACGACTTTTCCGAATACAGTCCCAGCTGCGGTTGAGATTGTGA 2631 0.4002 MAEIYVSNISASLLGKLASHVYEEASRAYVVYEDLQGIKDPLSIVNGVLLGAEEKKEQRQGLREWLRQIQNVCYDAEDVLDEFECLKLRKQVVKASGSTSMKVGHFFSSLNPLVFRLRVTRRIKDVRERLDKIAADGNKFGLERIGGDHRLVPRREMTHSHVDASGVIGRGNDREEIIKLLMQSHPHGDGDGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRMDELFQLKMWVCVSDDFDIRQMIIKIINSAAYASAPAIATQENISSLDIEQLQSRLRYKLSGQKFLLVLDDTWNDDRAKWTELKDLIKVGAAGSKIIVTTRSNSIASMIGTVPSYILEGLSIENCLSLFVKWAFKEGEEKKYPNLVEIGKEIVKKCQGVPLAVRTLGSSLFLNFDLERWEFVRDNEIWNLQQKKNDISPALKLSYDQMPSYLRHCFAFFSLYPKDFGFTGALIANLWAALGLLRSPVGSQKMENIARQYVDELHSRSFLEDFVDLGHFYYFKVHDLVHDLALYVSKGELLVVNYRTRNIPEQVRHLSVVENDPLSHVVFPKSRRMRTILFPIYGMGAESKNLLDTWIKRYKYLRVLDLSDSSVETLPNSIAKLQHLRALHLTNNCKIKRLPHSICKLQNLQYLSLRGCIELETLPKGLGMLISLRKLYITTKQSILSEDDFASLSNLQTLSFEYCDNLKFLFRGAQLPYLEVLLIQSCGSLESLPLHILPKLEVLFVIRCEMLNLSFNYESPMPRFRMKFLHLEHCSRQQTLPQWIQGAADTLQTLLILHFPSLEFLPEWLATMTRLKILHIFNCPQLLYLPSDMLGLTALERLIIDACPELCRKCHPQFGEYWSLIAHIKHISIGETKARQRLFRIQSQLRLRL* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1412 876 Gene3D - 425 514 IPR036388 -
Gso6g1412 876 CDD RX-CC_like 2 134 IPR038005 -
Gso6g1412 876 Pfam NB-ARC domain 193 427 IPR002182 GO:0043531
Gso6g1412 876 Gene3D - 11 124 - -
Gso6g1412 876 Gene3D Ribonuclease Inhibitor 525 871 IPR032675 -
Gso6g1412 876 SUPERFAMILY L domain-like 503 847 - -
Gso6g1412 876 Pfam Leucine rich repeat 583 639 IPR001611 GO:0005515
Gso6g1412 876 Pfam Rx N-terminal domain 12 96 IPR041118 -
Gso6g1412 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 439 IPR027417 -
Gso6g1412 876 Gene3D - 154 334 IPR027417 -
Gso6g1412 876 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 8 761 - -
Gso6g1412 876 PANTHER DISEASE RESISTANCE PROTEIN RP 8 761 IPR044974 GO:0006952
Gso6g1412 876 Gene3D - 340 424 IPR042197 -
Gso6g1412 876 PRINTS Disease resistance protein signature 198 213 - -
Gso6g1412 876 PRINTS Disease resistance protein signature 280 294 - -
Gso6g1412 876 PRINTS Disease resistance protein signature 377 391 - -
Gso6g1412 876 PRINTS Disease resistance protein signature 673 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1412 Gso-Chr6 14034350 14037936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1412 199 833 WRKY Transcription Factor Family AT5G45050 22.571 5.05e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1412 - - gmx:100812584 1725.68