Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1405 ATGGAAAGGCTAAATTTTATTAAAAATGGAGTGAGTAGATTGCCTCCAGGTTTTCGTTTCCAGCCAACAGATGAAGAGCTTGTGTTTCAGTACTTGAAATGTAAGATATTCTCGTGCCAGTTGCCAGCTTCAATCATTCCTGAGATTAATGTCAGCAAAAATGATCCTTGGGATTTGCCAGGAAATTGTGATGAGCAAGAGAGGTACTTTTTCAGCTCCAAGGAAGCCAAGTATCGAAACGGCAATCGTATGAACCGAACAACTAACTCTGGCTATTGGAAGGCAACAGGATCAGACAAAAAAATTTCATCATCAATAAGTAATATTGGTTTTGCGGGGCTTAGAAAAACTCTAGTATTTTATGAAGGAAAATCTCCAAATGGGTCTCGAACTGATTGGGTCATGCATGAATATCGACTCGTCAGCTTAGAAACTATTCCTTCCAATTCATCCCAGAACTATGCAAACGAGATAGGGGATTGGATTTTGTGTCGCATATTCATGAAGAAAAGAAGTATAGAAAGTGATAACAACAATACTGCTCCCAGAAAGAACAATGCAGTGACGAATTATGCTCAGGTGGCTCAGCCAAGATTCTTTGATTTTTTGAGTGTTCACAATTCAGCTCCTCCGGTTCCTATACAATATTCTTCTACATCCTCATCCTGTTCAAGTTCCAATAACGTTGTAGAGGCTTCTTCCCCTAATAACCACGAAGAAACAAGCAGCGGCTATGCTCATTTTTAA 747 0.3949 MERLNFIKNGVSRLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEINVSKNDPWDLPGNCDEQERYFFSSKEAKYRNGNRMNRTTNSGYWKATGSDKKISSSISNIGFAGLRKTLVFYEGKSPNGSRTDWVMHEYRLVSLETIPSNSSQNYANEIGDWILCRIFMKKRSIESDNNNTAPRKNNAVTNYAQVAQPRFFDFLSVHNSAPPVPIQYSSTSSSCSSSNNVVEASSPNNHEETSSGYAHF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1405 248 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Gso6g1405 248 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 248 - -
Gso6g1405 248 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Gso6g1405 248 MobiDBLite consensus disorder prediction 225 248 - -
Gso6g1405 248 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Gso6g1405 248 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 248 - -
Gso6g1405 248 ProSiteProfiles NAC domain profile. 14 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1405 Gso-Chr6 13946256 13947995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1405 1 172 NAC Transcription Factor Family AT5G13180 62.791 5.23e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso6g1405 NAM 4.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1405 - - gmx:100527806 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1405 6 13946256 13947995 Gso6g1405 6 13946256 13947995 ECH