Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1392 ATGGCTGATTTTCAGACCTCTACCCACAGAGCCAAGTGGATTTTCTCCCCTCAACAGCTGGTTGAGAAATATAGAGCTGCCAATCAGAGAGCCAAACAAATTCTAGAGAAGTGTGGAGCAACACTAATGGAAGTAGATGTTGATGGGTCGTTGTCATATCCTGAACCCCAAATGACTGCAAAGGATAGTGCTGAAAAGCATTCTCGAACAAAACCTCTTACTATTGAAGAAGAACAATGTATAAAGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAATTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTGCAATGGTCAGTGATGGAACATCAACCAAAACACATTATGTTGACCTGCATATATGCTGCCTGTAAAATAGAAGAAAATCATGTGTCAGCTGAGGAGCTTGGTAAGGGGATATCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTGTATGCACCATATCGCTCAGTTGAAGGTTTTATAAATGATATGGAGGAATTCTTTAATGCTGGTGATAACCAGCTTGAAATGCTCAAGACTTTGCAAGAGACAGCAAGATTTGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTTTACGCAACTCAAATGCACTCCACAGAGTCATTGACTTTGACAGTTATCTTAGGGGTATTTTTTCCCGTGAGAATTCCATGCATACAATGTCCGAGCTTTCTGAATCACTGGATGCAATTGATTCTTGGGTTAGAAAATACAAAAGTCCTTCTGAGAAGGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATCACTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGCTCAAATGAAGCTCAAAATATGCCATCTATTGCCTAG 1008 0.3958 MADFQTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVDGSLSYPEPQMTAKDSAEKHSRTKPLTIEEEQCIKVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFINDMEEFFNAGDNQLEMLKTLQETARFEVDKMMLTDAPLLFPPGQLALAALRNSNALHRVIDFDSYLRGIFSRENSMHTMSELSESLDAIDSWVRKYKSPSEKELKHINRKLKSCWGHHSHDEGKKREKKSKHKSKKSSNEAQNMPSIA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1392 335 CDD CYCLIN 89 167 IPR013763 -
Gso6g1392 335 PANTHER CYCLIN 1 330 IPR043198 GO:0006357|GO:0016538
Gso6g1392 335 SMART cyclin_7 87 168 IPR013763 -
Gso6g1392 335 Gene3D - 177 282 - -
Gso6g1392 335 Pfam Cyclin C-terminal domain 179 285 IPR031658 -
Gso6g1392 335 SUPERFAMILY Cyclin-like 179 304 IPR036915 -
Gso6g1392 335 MobiDBLite consensus disorder prediction 295 310 - -
Gso6g1392 335 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
Gso6g1392 335 PANTHER CYCLIN-H 1 330 - -
Gso6g1392 335 Gene3D - 63 175 - -
Gso6g1392 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Gso6g1392 335 MobiDBLite consensus disorder prediction 295 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1392 Gso-Chr6 13698894 13703746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1392 1 280 Core Cell Cycle Gene Families AT5G27620 65.714 4.99e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1392 K06634 - gmx:547736 659.833