Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1369 AATAATTGTTTCAGGGTGAAAAAAACTAGATTCAGGCACAGGCCGCGTGTGCCTTGCGTTTGGGACAAAGGGTTTTCTTCACTTCTTTTCCTAGCACTAGCAGTGAGCGTTACTCTGCCACCGTCGCCACCTGGGATTGCCGCCGGCGCTGCCACTCTTCAAGGCTTCATTGAAGACACGTCGCACCGCCAGTCTTCGTTGCCACTTGCTCACTCCTCCTTCTTCGCCGTCGCACCACCCAAGTCTCCAACTCAGCCTCGCCATTCGATCATTGCGACCGGAAGCGTGCTTATCGAGAAGAAATTTTTGAGAAATTGCAGCAAAGTTAGGCACATTGAGCATATTGTTGTGGATTCTAGCATTCGTGGGAAGCATTTGGGAAAGAGAATCATCAACTTCCTCTCGGATCATGCACGTTCAATGGGATGCTACAAGGTAATTCTTAATTGCAGTGTCCAGAACAAGACGTTCTACGAGAAATGTGGCTTCCTGCAGAAATCTGTTCAGATGGCTATGTAA 519 0.4855 NNCFRVKKTRFRHRPRVPCVWDKGFSSLLFLALAVSVTLPPSPPGIAAGAATLQGFIEDTSHRQSSLPLAHSSFFAVAPPKSPTQPRHSIIATGSVLIEKKFLRNCSKVRHIEHIVVDSSIRGKHLGKRIINFLSDHARSMGCYKVILNCSVQNKTFYEKCGFLQKSVQMAM* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1369 172 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 37 172 IPR000182 GO:0016407
Gso6g1369 172 Gene3D - 54 171 - -
Gso6g1369 172 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 85 172 - -
Gso6g1369 172 CDD NAT_SF 90 149 - -
Gso6g1369 172 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 90 168 IPR016181 -
Gso6g1369 172 Pfam Acetyltransferase (GNAT) family 90 163 IPR000182 GO:0016407
Gso6g1369 172 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 85 172 IPR039143 GO:0004343|GO:0006048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1369 Gso-Chr6 13451618 13452801 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso6g1369 Acetyltransf_1 3.6e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1369 K00621 - gmx:106799008 247.669