Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1360 ATGGATCAGTGGGATGCTCATCATCGACTCATGTTCATTGGTCGGCATGAGGAAGATGGAACTGCTGATACTTCTAAGGGAGAGGAATCAAATGATGAAGAAAAAATAAGTAAAACTGAACCCGTCTTTGTGCCTGAAACTAAGAAAAGGAAACGCCTTAGCCTTAGTCAGCTTAAAGAGGTGAAAGAGGAGTCTCATGGGAAGCAAAGCAGTAGCAAGTCTAAGAGAAAGAAGCATGATAGTAGGGATAGATGGTCAGCTGAGAGGTATCAATTGGCCGAGCAAAACATGTGGGAGGTACTAAAGGCTGAAGGGGCGACATTTGAAAACCCAATAACCCGACCTGCACTAAGATTAGCTGCCCGCAAACACATTGGAGATACTGGACTTTTAGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGGACTGAGCGTTTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGGTGCGCCAGGAGGCAGGGGTGCAGGACCCTTACTGGATACCGCCATCTACATATAGGGAAGCTGGTGCCCCCTCCCAGAATATTGATTCTTCTGGTGAATTGAAACAGCTTAAAATAGAATTGATGCAAATGAAGAAAGATATGCATGAGCTCATTGCCAAGAAGGAAGAGAAAAGTGATATTAACATGGTGGAGGAGACACACAAGGAATCTGTAAAGTGGAAATTTATGACTGACCATCGCCTTACTGAAATCATGACTTCTTTGAAGGATATTCAGGGGAAGTATGGTGAATTGATGATTTGGAAAACTACAGTTGAGCAACAACTTATGGAAATAACTGATAAATTGAATGATCTTCAAGCATCTAGGGAGTGCACCACTAATAGTCCTCCTTCAGAAAGGTGGCAAGATTGGATAGAAAGTACCAACCTAGACAATATTCAGGAAGATGCATTTGCAACTTGGATTGGGAATCCGGAGCTACTTAATGTTCCACAAGAGGTTATACTTGAAGATCCCAACACAACCATACCAACACAGCCACCCAGTGAAGAACTGACTAACAAGAGGAGCGATGTGCTGGAGTTAGTACCTGGTAAACTAGAAGATCAACCTAATGTAACCCCTGATTCTTCTACAACTGTTAATTCGAAGTCAGACCATGACAACAACTCATTGATCATGTTTCAGGAGATGTTTATGGATTTATACAAATGGAAAGAAAAAATGGAACAGCAGCTGTTGGAGGTATCGAATACTGTATATGGTATGCTGGCAATGAAGTAG 1302 0.4255 MDQWDAHHRLMFIGRHEEDGTADTSKGEESNDEEKISKTEPVFVPETKKRKRLSLSQLKEVKEESHGKQSSSKSKRKKHDSRDRWSAERYQLAEQNMWEVLKAEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPYWIPPSTYREAGAPSQNIDSSGELKQLKIELMQMKKDMHELIAKKEEKSDINMVEETHKESVKWKFMTDHRLTEIMTSLKDIQGKYGELMIWKTTVEQQLMEITDKLNDLQASRECTTNSPPSERWQDWIESTNLDNIQEDAFATWIGNPELLNVPQEVILEDPNTTIPTQPPSEELTNKRSDVLELVPGKLEDQPNVTPDSSTTVNSKSDHDNNSLIMFQEMFMDLYKWKEKMEQQLLEVSNTVYGMLAMK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1360 433 Coils Coil 274 294 - -
Gso6g1360 433 PANTHER DYAD PROTEIN 3 432 - -
Gso6g1360 433 Coils Coil 205 225 - -
Gso6g1360 433 MobiDBLite consensus disorder prediction 1 70 - -
Gso6g1360 433 MobiDBLite consensus disorder prediction 1 86 - -
Gso6g1360 433 MobiDBLite consensus disorder prediction 377 393 - -
Gso6g1360 433 PANTHER PROTEIN DYAD 3 432 IPR044221 GO:0007131|GO:0051177|GO:0051321
Gso6g1360 433 MobiDBLite consensus disorder prediction 371 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1360 Gso-Chr6 13379772 13383881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1360 70 165 PHD Transcription Factor Family AT5G22260 38.776 1.98e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1360 - - gmx:100789912 847.425