Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1356 ATGGACAAGGCACGATTTGGGTTTTTCTTCATGTTGCTCATTCTCCTTTCTTCTCAGATGGTGGTACAAACAGAGGGAAGGCACTGTGAGTCAAAGAGCCATCGGTTTAAAGGGATGTGCCTCAGTAAGCACAACTGCGCTTCGGTTTGCCATCTTGAAGGCTTCACGGGTGGCAAGTGTCGTGGATTTCGTAGACGCTGTTTCTGCACCAGGCACTGTTAG 222 0.491 MDKARFGFFFMLLILLSSQMVVQTEGRHCESKSHRFKGMCLSKHNCASVCHLEGFTGGKCRGFRRRCFCTRHC* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1356 73 Pfam Gamma-thionin family 27 73 - -
Gso6g1356 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Gso6g1356 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Gso6g1356 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Gso6g1356 73 PANTHER DEFENSIN-LIKE PROTEIN 1 1 73 - -
Gso6g1356 73 CDD Knot1 40 70 IPR003614 GO:0006952
Gso6g1356 73 SMART gth_4 28 73 IPR003614 GO:0006952
Gso6g1356 73 Gene3D - 27 73 IPR036574 -
Gso6g1356 73 PANTHER DEFENSIN 1 73 - -
Gso6g1356 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1356 Gso-Chr6 13310735 13311465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1356 1 73 Plant Defensins Gene Families AT5G63660 60.274 6.58e-27 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1356 - - gmx:100788332 114.39