Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1355 ATGGAGATGAGGAAATCATGTGGCTTCTTCTTGTTGCTCCTCCTCCTTGTCTTTGCTTCCCCAGAGGTGGTGGTGCAGACGGAGGGAAGAGTGTGTGAGTCACAAAGCCACGGGTTCCATGGTTTGTGTAATAGAGACCACAACTGTGCTTTGGTCTGCAGGAACGAAGGTTTCTCCGGTGGCAGGTGCAAAGGCTTCCGCCGCCGCTGCTTTTGCACCAGGATTTGTTGA 231 0.5281 MEMRKSCGFFLLLLLLVFASPEVVVQTEGRVCESQSHGFHGLCNRDHNCALVCRNEGFSGGRCKGFRRRCFCTRIC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1355 76 PANTHER DEFENSIN-LIKE PROTEIN 1 3 76 - -
Gso6g1355 76 SMART gth_4 31 76 IPR003614 GO:0006952
Gso6g1355 76 Pfam Gamma-thionin family 30 76 - -
Gso6g1355 76 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Gso6g1355 76 SUPERFAMILY Scorpion toxin-like 30 76 IPR036574 -
Gso6g1355 76 CDD Knot1 41 73 IPR003614 GO:0006952
Gso6g1355 76 PRINTS Purothionin signature 31 46 IPR008176 GO:0006952
Gso6g1355 76 PRINTS Purothionin signature 61 75 IPR008176 GO:0006952
Gso6g1355 76 PANTHER DEFENSIN-LIKE PROTEIN 6 3 76 - -
Gso6g1355 76 Gene3D - 30 76 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1355 Gso-Chr6 13304571 13305799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1355 1 76 Plant Defensins Gene Families AT5G63660 56.579 8.29e-26 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1355 - - gmx:547938 146.362