Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1338 ATGCAGGACGAGAAGAAGATGAAGGTGAAGAAAGGATTCCTTGGTGTTCAAGTGGGTTTAGAAGACGACGAAGAAGGTGGCTATTCCCCTCAAAGATTCGTGATCCCAATCTCTTACCTTTCCCACCCTCTCTTCAAGCGCCTTCTGGACAAGGCTCGCGAGGTTTACGGCTACCACACCGATGGCCCACTCAAGCTCCCGTGCTCCGTCGACGATTTCCTCCATCTCCGGTGGCGAATCGAGAAAGAGTCTGCTCCAAACCAAAACCACCATAACCACAGCCACCATCGCCTTCCACACGCTTTGCACTTCCACTCTTGTTAG 324 0.5216 MQDEKKMKVKKGFLGVQVGLEDDEEGGYSPQRFVIPISYLSHPLFKRLLDKAREVYGYHTDGPLKLPCSVDDFLHLRWRIEKESAPNQNHHNHSHHRLPHALHFHSC* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1338 107 Pfam Auxin responsive protein 6 79 IPR003676 GO:0009733
Gso6g1338 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 94 IPR003676 GO:0009733
Gso6g1338 107 PANTHER SMALL AUXIN-UP RNA-RELATED 7 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1338 Gso-Chr6 13137088 13137630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1338 9 81 Calmodulin-binding Proteins AT3G43120 46.575 9.12e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1338 K14488 - gmx:100306049 207.994