Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1331 ATGAGTGAATTTCGTTTGATGCTGCAGTTACCCAGGGAGATAACGCACGAGAATGTTGTGAAGCTTGTGAAAGTTCACATTAATCACATGGACATGTCTCTTTATCTGGCTTTTGATTATGCAGAACACGACCTCTATGAAATAATAAAGCATCATTGGGACAAAGTCAACCAATCCATTAACCAGTATACTGTTAAATCGTTACTCTGGCAGTTGCTCAATGGACTAAACTATCTACACAGTAATTGGACAATATATCGGAACCTAAAGCCATCAAATATACTGGTTATGGGTGAAGGAGAGGAACATGGAATTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAAGCACCTTTGAAGCCATTATTTGAAAATGGGGTATTTCAAAATTGA 399 0.3734 MSEFRLMLQLPREITHENVVKLVKVHINHMDMSLYLAFDYAEHDLYEIIKHHWDKVNQSINQYTVKSLLWQLLNGLNYLHSNWTIYRNLKPSNILVMGEGEEHGIVKIADFGLARIYQAPLKPLFENGVFQN* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1331 132 Gene3D Phosphorylase Kinase; domain 1 3 37 - -
Gso6g1331 132 SUPERFAMILY Protein kinase-like (PK-like) 9 119 IPR011009 -
Gso6g1331 132 Pfam Protein kinase domain 9 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1331 132 Gene3D Transferase(Phosphotransferase) domain 1 38 130 - -
Gso6g1331 132 PANTHER CYCLIN-DEPENDENT KINASE E-1 9 116 - -
Gso6g1331 132 PANTHER CELL DIVISION PROTEIN KINASE 9 116 - -
Gso6g1331 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1331 132 SMART serkin_6 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1331 Gso-Chr6 13029881 13033743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1331 12 129 Core Cell Cycle Gene Families AT5G63610 84.746 1.19e-67 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gso6g1331 Pkinase 1.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1331 K02208 - gmx:100775334 271.552