Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1304 ATGGCCATCACAGATTTTGTGTCCAAAAGGATGACATACACCTTGTTCTTGAACACTTGTTTCCTCCTTGTGATTTTTTCCTTCATGATTGTTCATTTCCACACCCCTGAAGTTGTGGTTGTGACCAAAATCTCTGCCTTTGATAACATCAAAGAGCAAGAGTGTGAGAGCTTAGACAGCTTAGGTGACTACAAAGCCAAGTGCTTGTACCTGAAATCCAATGACCCTTGTGCCTCTCAGGGCTATATTGATTATCTCTACCTTTTCTATTGCAAATTTGGGAAATTCCCTTCATTGGGTTACACCCTTTTGTTTCTTTGGCTCCTAGTTCTGTTTTATTTGTTGGCTAATACAACTTCTGAATACTTTTGTCCCTCCCTCGAAAGCCTTTCCAAGTTACTAAGGTTGTCTCCTACAATTGCTGGAGTCACCCTACTCTCTCTGGGCAATGGTGCCCCTGACGTTTTCTCTAGCCTTGTCTCCTTCCAAGAAACCGGGACACGCGACATCGGCTTCAACACGGTTCTCGGGGGTGTTTCCTTTGTGTCCTGTGTTGTGGTGGGGAGTGTGAGCATTGCAATACGTCAAAGTGGGGTTCAAGTTGCCAAGTCTGCGTTTATGAGAGATGCTTATTTTCTCCTTTTTGTTCTTCTGGCCTTGTTTGGTATTTTGATATATGGTAAGATCAATTTTCTTGGAGCAATTGGTTTTACTTTGATATATGTTGTGTATGTAGTTATTGTTTATGTCTCTTCTACCCGATGGAAGGAAGGTGATGGTGGTGATGATGAAAATGGTGATATTGGTATTTCACATTGTGAAGATGATTTGAATTTGAGTTTGAGTGTGCCTCTTCTTAATGATGTGAAGAAAGGACCAGTTGTATGTGTTGAAAATGGTGTTCAAGAATATGATTTTAATATCGAGAAAGATTACTGTTGTATGAGATATTCAATGTGTCGAGTGTCACTTCATGTTCTGGAAATGCCCCTTTACTTGCCAAGGAGATTGACAATTCCTGTTGTGTGCGAAGAGAGATGGTCAAAGGTGTATGCAGTTTCTTCAGTTACACTAGCTCCACTTCTCTTGTCTTTCCTGTGGTGGAGTCCTTACATTGTAAACAGTTTCTTCAGCAAGAACGTAATTGTTTATGGAATTGGAATCTTGTTTGGAACTATACTTGGTGTGATTGCATTTTTCACAACCAAAATGTCAGGGCCACCAAATAAGTGCTTATTTCCTTGGCTTGCAGGAGGGTTTGTAATGAGTGTGACATGGAGCTACATCATAGCTCAAGAGTTGGTAGGGTTGCTTGTTTCAATTGGCTACATATGCGGAATAAGTCCTTCAATGCTAGGGCTAACAGTTCTGGCTTGGGGGAACTCAATTGGGGATTTGATGACAAATTTAACAATGGCTTTAAATGGTGGACAAGATGGTGCTCAAGTAGCAATGTCAGGTTGCTATGCTGGTCCTATCTTCAATACCCTTATTGGTTTGGGCTTGTCTCTTGTAACTTGTACATGGTCAGAGTACCCTCAAGCTGTTGTGATCCCTAGAGACCCATATCTCTGGGAGACAATGGTGTTTTTGGTGGCTGGATTAGTTTGGGCACTTGTGGTGTTGATAAAAAGAGATATGAAGCTTGACGGACTCTTGGGAGGAGGACTTTTATCTGTTTACTTCCTTTCTCTGTTTATAAGGTTGATTCAGACAAAAGGGTCTCTCCAATAG 1734 0.4135 MAITDFVSKRMTYTLFLNTCFLLVIFSFMIVHFHTPEVVVVTKISAFDNIKEQECESLDSLGDYKAKCLYLKSNDPCASQGYIDYLYLFYCKFGKFPSLGYTLLFLWLLVLFYLLANTTSEYFCPSLESLSKLLRLSPTIAGVTLLSLGNGAPDVFSSLVSFQETGTRDIGFNTVLGGVSFVSCVVVGSVSIAIRQSGVQVAKSAFMRDAYFLLFVLLALFGILIYGKINFLGAIGFTLIYVVYVVIVYVSSTRWKEGDGGDDENGDIGISHCEDDLNLSLSVPLLNDVKKGPVVCVENGVQEYDFNIEKDYCCMRYSMCRVSLHVLEMPLYLPRRLTIPVVCEERWSKVYAVSSVTLAPLLLSFLWWSPYIVNSFFSKNVIVYGIGILFGTILGVIAFFTTKMSGPPNKCLFPWLAGGFVMSVTWSYIIAQELVGLLVSIGYICGISPSMLGLTVLAWGNSIGDLMTNLTMALNGGQDGAQVAMSGCYAGPIFNTLIGLGLSLVTCTWSEYPQAVVIPRDPYLWETMVFLVAGLVWALVVLIKRDMKLDGLLGGGLLSVYFLSLFIRLIQTKGSLQ* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1304 577 PANTHER CATION CALCIUM EXCHANGER 1 577 - -
Gso6g1304 577 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 577 - -
Gso6g1304 577 Pfam Sodium/calcium exchanger protein 105 249 IPR004837 GO:0016021|GO:0055085
Gso6g1304 577 Pfam Sodium/calcium exchanger protein 416 569 IPR004837 GO:0016021|GO:0055085
Gso6g1304 577 Gene3D - 352 570 IPR044880 -
Gso6g1304 577 Gene3D - 136 269 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1304 Gso-Chr6 12753594 12755939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1304 6 577 Antiporters AT5G17850 53.819 3.01e-170 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1304 K13754 - gmx:100813848 1079.7