Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1268 ATGGAATGTGAAGGCAAATTGGCGAGGAGGGTGGTGGGAGTGAGAAATCATTGTTACCTTTTGAAATCCAAAATCGGAGAGGGTTCATTCTCCGCCGTGTGGAGAGCGGAGCAGAGACCACCAACCGGCGATGACGTGGCGGTGAAGCAGGTCTTCCTCTCCAAACTCAACCCTCGCCTCAAGGCATGTTTGGATTGCGAGATCAATTTCTTGTCCTCTGTTAACCACCCCAATACTATTCGCCTTCTTCACTTCTTCCAGTATGATGGATGTGTATACCTGGTCCTTGAGTTTTGTGCTGGAGGAAATCTAGCTTCTTATATTCAAAATCATGGGAGAGTTCACCAACAAATAGCCAGAAAATTCATGCAGCAGCTTGGACTATATGTCCCGGTGAATATGCCGGGACAGTCTGTGGTTCTCCATTATGCATGGCTCCAGAAGCTCTTAAGTTCCAGAGATATGATGACAAGGCAGATATGTGGAGTGTTGGAACCATTCTTTTTGAGCTTCTAA 516 0.4651 MECEGKLARRVVGVRNHCYLLKSKIGEGSFSAVWRAEQRPPTGDDVAVKQVFLSKLNPRLKACLDCEINFLSSVNHPNTIRLLHFFQYDGCVYLVLEFCAGGNLASYIQNHGRVHQQIARKFMQQLGLYVPVNMPGQSVVLHYAWLQKLLSSRDMMTRQICGVLEPFFLSF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1268 171 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Gso6g1268 171 Gene3D Transferase(Phosphotransferase) domain 1 14 130 - -
Gso6g1268 171 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 19 127 IPR045269 GO:0004674|GO:0006914
Gso6g1268 171 ProSiteProfiles Protein kinase domain profile. 19 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1268 171 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 19 127 - -
Gso6g1268 171 Pfam Protein kinase domain 21 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso6g1268 171 SUPERFAMILY Protein kinase-like (PK-like) 13 126 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1268 Gso-Chr6 12363519 12366443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1268 19 126 CBL-interacting serine-threonine protein kinases AT5G35410 37.615 6.52e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gso6g1268 Pkinase 4.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1268 - - gmx:100799428 324.709