Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1266 ATGGCTGGCATGAACTCTAGCGTATTGGCCTGTAGCTATGCCATATCTGGTGCAGCATGCTCCGAGCTCAATGGGAAGGTCACTTCCGTGGCCTCTGTTGCATCCTCTGGCTACAAGTTGCCATTGATCAAATGTGAGGCCAGAGTTCCCAAAGCCAAAGAATCTGAAGGAAGGAGAGGTGCCCTTGTTCTCTTGGCAGCTACCCTTTTCATCTCTGCAGCCTCCAATTCTTCTGCCAATGCTGGGATCATTGATGATTACCTTGAGAGGAGCAAGGCTAACAAGGAATTGAATGACAAGAAGAGGTTAGCTACTACTGGAGCAAACTTTGCAAGAGCATACACCGTGGAATTCGGTAGTTGCAAGTTCCCTGAGAACTTCACTGGTTGCCAAGATCTTGCCAAACAAAAGAAAGTGCCATTCCTTAGTGACGATTTGGAGCTTGAATGCGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGA 501 0.4691 MAGMNSSVLACSYAISGAACSELNGKVTSVASVASSGYKLPLIKCEARVPKAKESEGRRGALVLLAATLFISAASNSSANAGIIDDYLERSKANKELNDKKRLATTGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1266 166 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 50 166 IPR008796 GO:0009522|GO:0015979
Gso6g1266 166 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 166 IPR008796 GO:0009522|GO:0015979
Gso6g1266 166 Gene3D - 82 166 IPR044907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1266 Gso-Chr6 12341152 12342632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1266 1 137 Calmodulin-binding Proteins AT5G64040 66.901 1.98e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1266 K02701 - gmx:100306036 330.487