Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1260 ATGAAAGGAAACAACCCTTATTTGATTGTGGTTCTCGTACAAGCCATATATGCTGCTATGTTCCTTCTCTCAAAAGCTGCATTCGATCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGGCAGTAGCAACCATCTTTCTCACCCCTTTCACTTTCTTCTTCGAATGGAAAACTGCACCGCCTATGCCCTTTCGGACCTTCTGCAAGATTTTCTTCCTTTCTTTATTTGGGATTACTTTAAGCTTGGACATATATGGTATCGGCCTTATTTACACCTCAGCAACTTTGGCTGCTGCTACCACAAACTGTCTTCCAGCTATCACCTTCTTCTTGGCGTTCCTACTAAGGATTGAGAGTTTGAAAATAAAGACGACCCCTGGAATTGCTAAGTTGATAGGGGTTGTGGCATGCTTGGCTGGTGCAGCAACCTTTGCCTTTTATAAAGGCCCTTCTTTGAAATTTCTAAGCCATTTTCATCTTTTGGATTACCATAAAAGCATTCAACATCAAGGTCATGCTCAATCCGGTGCATGGATAAAGGGTTGCTTCCTCATGCTCCTCTCCAACACGTTTTTCGGGCTATGGCTTGTACTACAGACTTTTATTATAAAAGGGTACCCTTCAAAGCTGCTCTTCACAACTATTCAGTGTTTCTTAAGTTCAATTCAGTCTTTTGTCATTGCCTTGGCCGTAGAAAGGGACATTGAACAATGGAAGTTGGGTTGGAATGTCAGGCTCCTCGCCGTACTATATTGTGGAATTATGGTCACCGGTGTCTCATATTACTTACAAACATGGGTCATAGAAAAGAAAGGACCCGTGTTTCTAGCCATGTCAACTCCATTGGCTCTCATTATTACAATCTTTGCCTCTGCAGCTGTGTTGGGTGAGATAATCAGTTTGGGAAGTCTTCTAGGAGGGTTCGTATTGATTCTAGGACTGTACAGCGTATTGTGGGGAAAGAACAGGGAGCACATGCCAAAAGCCACATTAGACATGGAGCAAGCATCATCGGGTTAA 1026 0.4259 MKGNNPYLIVVLVQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAVATIFLTPFTFFFEWKTAPPMPFRTFCKIFFLSLFGITLSLDIYGIGLIYTSATLAAATTNCLPAITFFLAFLLRIESLKIKTTPGIAKLIGVVACLAGAATFAFYKGPSLKFLSHFHLLDYHKSIQHQGHAQSGAWIKGCFLMLLSNTFFGLWLVLQTFIIKGYPSKLLFTTIQCFLSSIQSFVIALAVERDIEQWKLGWNVRLLAVLYCGIMVTGVSYYLQTWVIEKKGPVFLAMSTPLALIITIFASAAVLGEIISLGSLLGGFVLILGLYSVLWGKNREHMPKATLDMEQASSG* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1260 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Gso6g1260 341 PANTHER WAT1-RELATED PROTEIN 7 328 IPR030184 GO:0016021|GO:0022857
Gso6g1260 341 Pfam EamA-like transporter family 6 143 IPR000620 GO:0016020|GO:0016021
Gso6g1260 341 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Gso6g1260 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 148 - -
Gso6g1260 341 PANTHER WAT1-RELATED PROTEIN 7 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1260 Gso-Chr6 12289486 12293383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1260 1 254 Nodulin-like Gene Family AT5G64700 60.465 1.92e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1260 - - gmx:100804562 661.373