Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1245 ATGATGTCAACAACTAATGTTAACCATAGCTTGTTTGAAGAACAAGATCAGATCCCTACGCAGATGGGGCTGTTCAATATTATTCCTTTCCCACCAAACCAAACCTACCCACCTTTGGGTTGTCAAACAGTAACTTTGAAATCCATCAGTGCAATAGCTCCTTCACTTTCATCTGCTGCAAATTTTTCTGAAACCCTACTTTCAACCGCTGTTAATCAAAGACCACGAGAAGAAGATCTCACTTCAAGTTTGGTAGGAGGAGGTGGAGGCCAACTCCTTTCCTTGAGCAGATCGAGAGTGAATTCATGGGCATGGGAGGAAGTAAGCGATTGCTTGATGGGTAAAAGAATTGGAGGAGATGATAATCATCATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTAAAGAAACGCGTGGAGCGCTTGGCAGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACACGTGCACTCGCCATCAAATGAACTTGAAGACTCGCAAACCCCTTCTGAACTTAGTAATTTCCTGTGGTAG 711 0.4444 MMSTTNVNHSLFEEQDQIPTQMGLFNIIPFPPNQTYPPLGCQTVTLKSISAIAPSLSSAANFSETLLSTAVNQRPREEDLTSSLVGGGGGQLLSLSRSRVNSWAWEEVSDCLMGKRIGGDDNHHHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQTPSELSNFLW* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1245 236 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 227 IPR044810 GO:0003700
Gso6g1245 236 MobiDBLite consensus disorder prediction 221 236 - -
Gso6g1245 236 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1245 236 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1245 236 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1245 236 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 71 227 - -
Gso6g1245 236 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso6g1245 236 SUPERFAMILY WRKY DNA-binding domain 151 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso6g1245 236 MobiDBLite consensus disorder prediction 211 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1245 Gso-Chr6 12107640 12110791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1245 49 236 WRKY Transcription Factor Family AT4G39410 50.213 6.38e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso6g1245 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1245 - - gmx:100799241 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1827 4 48543906 48547168 Gso6g1245 6 12107640 12110791 GST